| Chain sequence(s) |
A: QVQLQESGGGLVQAGDSLRLSCAASGNAFILYGMAWYRQPPGKAREFVAGITWSGGNPHYAASVKGRFTISRDNAKNTVYLQMDSLKSDDTAVYYCAANPSPRGSHNDYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:09)
[INFO] Main: Simulation completed successfully. (00:01:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.4245 | |
| 2 | V | A | -1.0940 | |
| 3 | Q | A | -1.7154 | |
| 4 | L | A | 0.0000 | |
| 5 | Q | A | -1.5965 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -1.0298 | |
| 8 | G | A | -0.9895 | |
| 9 | G | A | -0.8141 | |
| 10 | G | A | -0.0313 | |
| 11 | L | A | 1.0548 | |
| 12 | V | A | -0.1721 | |
| 13 | Q | A | -1.5026 | |
| 14 | A | A | -1.8103 | |
| 15 | G | A | -1.7954 | |
| 16 | D | A | -1.8258 | |
| 17 | S | A | -1.6872 | |
| 18 | L | A | -1.2561 | |
| 19 | R | A | -2.1576 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.8352 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -1.1124 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.3597 | |
| 26 | G | A | -1.2944 | |
| 27 | N | A | -0.8756 | |
| 28 | A | A | 0.1032 | |
| 29 | F | A | 0.0000 | |
| 30 | I | A | 1.7413 | |
| 31 | L | A | 2.3005 | |
| 32 | Y | A | 1.2391 | |
| 33 | G | A | 0.5495 | |
| 34 | M | A | 0.0000 | |
| 35 | A | A | 0.1166 | |
| 36 | W | A | 0.0000 | |
| 37 | Y | A | 0.2278 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -1.2833 | |
| 40 | P | A | 0.0000 | |
| 41 | P | A | -1.3102 | |
| 42 | G | A | -1.5417 | |
| 43 | K | A | -2.3626 | |
| 44 | A | A | -1.5965 | |
| 45 | R | A | -1.4163 | |
| 46 | E | A | -0.9117 | |
| 47 | F | A | 0.3954 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | G | A | -0.4231 | |
| 51 | I | A | 0.0000 | |
| 52 | T | A | -0.0592 | |
| 53 | W | A | 0.9989 | |
| 54 | S | A | 0.1293 | |
| 55 | G | A | -0.5773 | |
| 56 | G | A | -1.0045 | |
| 57 | N | A | -1.6568 | |
| 58 | P | A | -1.2992 | |
| 59 | H | A | -1.4053 | |
| 60 | Y | A | -0.8722 | |
| 61 | A | A | -0.4816 | |
| 62 | A | A | -0.6228 | |
| 63 | S | A | -0.8020 | |
| 64 | V | A | 0.0000 | |
| 65 | K | A | -2.1097 | |
| 66 | G | A | -1.5424 | |
| 67 | R | A | -1.5596 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -0.9980 | |
| 70 | I | A | 0.0000 | |
| 71 | S | A | -0.5532 | |
| 72 | R | A | -0.9228 | |
| 73 | D | A | -1.6641 | |
| 74 | N | A | -1.7757 | |
| 75 | A | A | -1.3918 | |
| 76 | K | A | -2.3690 | |
| 77 | N | A | -1.6817 | |
| 78 | T | A | 0.0000 | |
| 79 | V | A | 0.0000 | |
| 80 | Y | A | -0.6254 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.2643 | |
| 83 | M | A | 0.0000 | |
| 84 | D | A | -1.8146 | |
| 85 | S | A | -1.6158 | |
| 86 | L | A | 0.0000 | |
| 87 | K | A | -2.7590 | |
| 88 | S | A | -2.0176 | |
| 89 | D | A | -2.4248 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.9557 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | -0.5599 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | -0.3276 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | A | A | 0.0000 | |
| 99 | N | A | -0.8480 | |
| 100 | P | A | -0.6362 | |
| 101 | S | A | -1.2685 | |
| 102 | P | A | -1.2730 | |
| 103 | R | A | -2.4045 | |
| 104 | G | A | -2.0660 | |
| 105 | S | A | -1.9397 | |
| 106 | H | A | -2.1283 | |
| 107 | N | A | -2.0360 | |
| 108 | D | A | -1.2706 | |
| 109 | Y | A | -0.4216 | |
| 110 | W | A | -0.1234 | |
| 111 | G | A | -0.8071 | |
| 112 | Q | A | -1.4065 | |
| 113 | G | A | -0.9449 | |
| 114 | T | A | 0.0000 | |
| 115 | Q | A | -1.0473 | |
| 116 | V | A | 0.0000 | |
| 117 | T | A | -0.3115 | |
| 118 | V | A | 0.0000 | |
| 119 | S | A | -0.8556 | |
| 120 | S | A | -0.9007 |