| Chain sequence(s) |
B: DEKAKTAETLIWQLFGKAMQQSDPNEAEKLLKKAEELAKKANDPRLEQVVRQHQVVVRFLVG
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:10)
[INFO] Main: Simulation completed successfully. (00:02:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | B | -3.6518 | |
| 2 | E | B | -4.2103 | |
| 3 | K | B | -3.8293 | |
| 4 | A | B | -3.5863 | |
| 5 | K | B | -3.5409 | |
| 6 | T | B | -2.2132 | |
| 7 | A | B | -1.8021 | |
| 8 | E | B | -1.6601 | |
| 9 | T | B | -0.7366 | |
| 10 | L | B | 0.0269 | |
| 11 | I | B | 0.0000 | |
| 12 | W | B | 0.1360 | |
| 13 | Q | B | -0.9506 | |
| 14 | L | B | 0.0000 | |
| 15 | F | B | -0.2374 | |
| 16 | G | B | -1.0069 | |
| 17 | K | B | -1.8989 | |
| 18 | A | B | 0.0000 | |
| 19 | M | B | -0.7291 | |
| 20 | Q | B | -1.7714 | |
| 21 | Q | B | -1.9825 | |
| 22 | S | B | -1.5732 | |
| 23 | D | B | -2.4310 | |
| 24 | P | B | -2.4317 | |
| 25 | N | B | -2.9603 | |
| 26 | E | B | -3.1386 | |
| 27 | A | B | 0.0000 | |
| 28 | E | B | -3.1895 | |
| 29 | K | B | -3.5389 | |
| 30 | L | B | -2.7921 | |
| 31 | L | B | 0.0000 | |
| 32 | K | B | -3.6643 | |
| 33 | K | B | -3.3444 | |
| 34 | A | B | 0.0000 | |
| 35 | E | B | -3.2238 | |
| 36 | E | B | -3.6624 | |
| 37 | L | B | -2.5091 | |
| 38 | A | B | 0.0000 | |
| 39 | K | B | -3.5445 | |
| 40 | K | B | -3.1989 | |
| 41 | A | B | -2.8661 | |
| 42 | N | B | -2.6722 | |
| 43 | D | B | -2.3526 | |
| 44 | P | B | -2.1808 | |
| 45 | R | B | -2.8221 | |
| 46 | L | B | 0.0000 | |
| 47 | E | B | -2.7567 | |
| 48 | Q | B | -2.5500 | |
| 49 | V | B | -1.4424 | |
| 50 | V | B | 0.0000 | |
| 51 | R | B | -1.6815 | |
| 52 | Q | B | -1.2957 | |
| 53 | H | B | 0.0000 | |
| 54 | Q | B | -0.5608 | |
| 55 | V | B | 0.8549 | |
| 56 | V | B | 1.3071 | |
| 57 | V | B | 0.0000 | |
| 58 | R | B | 0.2645 | |
| 59 | F | B | 2.4132 | |
| 60 | L | B | 2.4692 | |
| 61 | V | B | 0.6920 | |
| 62 | G | B | -0.0299 |