| Chain sequence(s) |
H: EVQLVQSGTEVKKPGESLKISCKGSGYTVTSYWIGWVRQMPGKGLEWMGFIYPGDSETRYSPTFQGQVTISADKSFNTAFLQWSSLKASDTAMYYCARVGSGWYPYTFDIWGQGTMVTVSS
L: EIVMTQSPATLSVSPGERATLSCRASESISSNLAWYQQKPGQAPRLFIYTASTRATDIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPSITFGQGTR input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:44)
[INFO] Main: Simulation completed successfully. (00:00:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.8134 | |
| 2 | V | H | -0.6926 | |
| 3 | Q | H | -0.6003 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.7595 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.4356 | |
| 8 | G | H | -0.5156 | |
| 9 | T | H | -0.0117 | |
| 11 | E | H | 0.1280 | |
| 12 | V | H | 1.0963 | |
| 13 | K | H | -0.8434 | |
| 14 | K | H | -2.0207 | |
| 15 | P | H | -1.8406 | |
| 16 | G | H | -1.8530 | |
| 17 | E | H | -2.3262 | |
| 18 | S | H | -1.6790 | |
| 19 | L | H | 0.0000 | |
| 20 | K | H | -1.3460 | |
| 21 | I | H | 0.0000 | |
| 22 | S | H | -0.3945 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -0.7422 | |
| 25 | G | H | 0.0000 | |
| 26 | S | H | -0.6731 | |
| 27 | G | H | -0.9164 | |
| 28 | Y | H | -0.3525 | |
| 29 | T | H | -0.0839 | |
| 30 | V | H | 0.0000 | |
| 35 | T | H | -0.7251 | |
| 36 | S | H | -0.2003 | |
| 37 | Y | H | 0.3028 | |
| 38 | W | H | 0.0000 | |
| 39 | I | H | 0.0000 | |
| 40 | G | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | -0.4749 | |
| 44 | Q | H | -0.7478 | |
| 45 | M | H | -0.7006 | |
| 46 | P | H | -0.8694 | |
| 47 | G | H | -1.3830 | |
| 48 | K | H | -2.2523 | |
| 49 | G | H | -1.5104 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.8101 | |
| 52 | W | H | 0.0000 | |
| 53 | M | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | F | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | Y | H | -0.5519 | |
| 58 | P | H | 0.0000 | |
| 59 | G | H | -1.3880 | |
| 62 | D | H | -2.2313 | |
| 63 | S | H | -1.4776 | |
| 64 | E | H | -1.4864 | |
| 65 | T | H | -1.0222 | |
| 66 | R | H | -1.2707 | |
| 67 | Y | H | -0.8869 | |
| 68 | S | H | -0.8863 | |
| 69 | P | H | -1.1145 | |
| 70 | T | H | -0.7227 | |
| 71 | F | H | 0.0000 | |
| 72 | Q | H | -1.8668 | |
| 74 | G | H | -1.4750 | |
| 75 | Q | H | -1.6117 | |
| 76 | V | H | 0.0000 | |
| 77 | T | H | -0.7452 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.4023 | |
| 80 | A | H | -0.5744 | |
| 81 | D | H | -0.6077 | |
| 82 | K | H | -1.0506 | |
| 83 | S | H | 0.0624 | |
| 84 | F | H | 1.0156 | |
| 85 | N | H | -0.3205 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | F | H | -0.3657 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.0414 | |
| 91 | W | H | 0.0000 | |
| 92 | S | H | -1.0997 | |
| 93 | S | H | -1.4318 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -1.4969 | |
| 96 | A | H | -0.8294 | |
| 97 | S | H | -0.4261 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.0328 | |
| 100 | A | H | 0.0000 | |
| 101 | M | H | 0.0333 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | -0.0916 | |
| 107 | V | H | 0.0000 | |
| 108 | G | H | 0.0000 | |
| 109 | S | H | 0.1810 | |
| 110 | G | H | 0.8716 | |
| 111 | W | H | 1.8694 | |
| 112A | Y | H | 1.8379 | |
| 112 | P | H | 0.0000 | |
| 113 | Y | H | 0.8188 | |
| 114 | T | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.4051 | |
| 117 | I | H | -0.1475 | |
| 118 | W | H | -0.2410 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -0.9682 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | 0.0000 | |
| 123 | M | H | 0.2089 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.1721 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7583 | |
| 128 | S | H | -0.8671 | |
| 1 | E | L | -1.6207 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.7064 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.5742 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.8360 | |
| 8 | P | L | -0.4564 | |
| 9 | A | L | -0.6547 | |
| 10 | T | L | -0.7029 | |
| 11 | L | L | -0.0964 | |
| 12 | S | L | -0.0742 | |
| 13 | V | L | -0.4912 | |
| 14 | S | L | -1.0526 | |
| 15 | P | L | -1.4864 | |
| 16 | G | L | -2.0196 | |
| 17 | E | L | -3.0660 | |
| 18 | R | L | -2.9722 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.6883 | |
| 21 | L | L | 0.0000 | |
| 22 | S | L | -0.8929 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.3593 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -0.9167 | |
| 27 | E | L | -1.5266 | |
| 28 | S | L | -1.3296 | |
| 29 | I | L | 0.0000 | |
| 36 | S | L | -0.7802 | |
| 37 | S | L | -0.5329 | |
| 38 | N | L | 0.0000 | |
| 39 | L | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.2430 | |
| 46 | P | L | -0.8766 | |
| 47 | G | L | -1.2659 | |
| 48 | Q | L | -1.8039 | |
| 49 | A | L | -1.2145 | |
| 50 | P | L | 0.0000 | |
| 51 | R | L | -1.3653 | |
| 52 | L | L | 0.0000 | |
| 53 | F | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.2125 | |
| 56 | T | L | -0.0345 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.4503 | |
| 66 | T | L | -0.4446 | |
| 67 | R | L | -1.1613 | |
| 68 | A | L | -1.0251 | |
| 69 | T | L | -1.2019 | |
| 70 | D | L | -1.9792 | |
| 71 | I | L | 0.0000 | |
| 72 | P | L | -0.7974 | |
| 74 | A | L | -0.5832 | |
| 75 | R | L | -0.7149 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.5540 | |
| 78 | G | L | -0.4403 | |
| 79 | S | L | -0.6642 | |
| 80 | G | L | -1.1439 | |
| 83 | S | L | -1.1258 | |
| 84 | G | L | -1.2320 | |
| 85 | T | L | -1.7796 | |
| 86 | E | L | -2.3226 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.8222 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6224 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.4664 | |
| 93 | S | L | -1.9030 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -1.3963 | |
| 96 | S | L | -0.8082 | |
| 97 | E | L | -1.1964 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | 0.3937 | |
| 100 | A | L | -0.2995 | |
| 101 | V | L | 0.0000 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | 0.0000 | |
| 108 | N | L | -0.5223 | |
| 109 | N | L | -0.8781 | |
| 113 | W | L | -0.0315 | |
| 114 | P | L | -0.0538 | |
| 115 | S | L | 0.0000 | |
| 116 | I | L | 0.0000 | |
| 117 | T | L | -0.2375 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.3539 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | R | L | -1.7258 |