Chain sequence(s) |
H: QVQLVQSGPELKKPGASVKVSCKASGYTFTDYVIHWVKQATGQGLEWIGEIYPGSGSAYSNAKFKDRVTMTADKSSNTAYMELSSLTSDDTAVYFCARRGNGTGFAYWGQGTLVTVSS
L: DIVLTQSPASLAVSLGQRATITCKAGQSVDYDGDSYMNWYQQKPGQPPKLLIYVASNLESGIPARFSGSGSGTDFTLNIHPVEENDAATYYCQQSYKDPLTFGQGTKLEIK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:59) [INFO] Main: Simulation completed successfully. (00:02:00) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.4152 | |
2 | V | H | -0.7031 | |
3 | Q | H | -1.3195 | |
4 | L | H | 0.0000 | |
5 | V | H | 0.0613 | |
6 | Q | H | 0.0000 | |
7 | S | H | -0.6110 | |
8 | G | H | -0.6845 | |
9 | P | H | -0.2245 | |
11 | E | H | -0.1921 | |
12 | L | H | 0.6766 | |
13 | K | H | -0.7816 | |
14 | K | H | -1.9037 | |
15 | P | H | -1.3008 | |
16 | G | H | -1.1566 | |
17 | A | H | -0.8234 | |
18 | S | H | -1.0813 | |
19 | V | H | 0.0000 | |
20 | K | H | -1.6581 | |
21 | V | H | 0.0000 | |
22 | S | H | -0.4816 | |
23 | C | H | 0.0000 | |
24 | K | H | -1.0519 | |
25 | A | H | 0.0000 | |
26 | S | H | -0.9614 | |
27 | G | H | -0.9733 | |
28 | Y | H | -0.6055 | |
29 | T | H | -0.6263 | |
30 | F | H | 0.0000 | |
35 | T | H | -1.0009 | |
36 | D | H | -1.4005 | |
37 | Y | H | -0.4660 | |
38 | V | H | 0.0292 | |
39 | I | H | 0.0000 | |
40 | H | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | V | H | 0.0000 | |
43 | K | H | 0.0000 | |
44 | Q | H | -0.5185 | |
45 | A | H | -0.8497 | |
46 | T | H | -0.5892 | |
47 | G | H | -1.1591 | |
48 | Q | H | -1.8053 | |
49 | G | H | -1.3257 | |
50 | L | H | 0.0000 | |
51 | E | H | -0.7766 | |
52 | W | H | 0.0000 | |
53 | I | H | 0.0000 | |
54 | G | H | 0.0000 | |
55 | E | H | 0.0000 | |
56 | I | H | 0.0000 | |
57 | Y | H | 0.4191 | |
58 | P | H | 0.0000 | |
59 | G | H | -0.8146 | |
62 | S | H | -0.5995 | |
63 | G | H | -0.4606 | |
64 | S | H | 0.1776 | |
65 | A | H | 0.6952 | |
66 | Y | H | 0.8033 | |
67 | S | H | -0.8524 | |
68 | N | H | -1.7478 | |
69 | A | H | -2.0756 | |
70 | K | H | -2.5871 | |
71 | F | H | 0.0000 | |
72 | K | H | -3.0617 | |
74 | D | H | -3.2021 | |
75 | R | H | -2.2669 | |
76 | V | H | 0.0000 | |
77 | T | H | -0.8486 | |
78 | M | H | 0.0403 | |
79 | T | H | -0.1968 | |
80 | A | H | -0.7245 | |
81 | D | H | -1.4043 | |
82 | K | H | -1.6066 | |
83 | S | H | -1.0065 | |
84 | S | H | -1.0223 | |
85 | N | H | -1.3221 | |
86 | T | H | 0.0000 | |
87 | A | H | 0.0000 | |
88 | Y | H | -0.4444 | |
89 | M | H | 0.0000 | |
90 | E | H | -1.0834 | |
91 | L | H | 0.0000 | |
92 | S | H | -1.0608 | |
93 | S | H | -1.0118 | |
94 | L | H | 0.0000 | |
95 | T | H | -1.2843 | |
96 | S | H | -1.4796 | |
97 | D | H | -1.9104 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.4614 | |
100 | A | H | 0.0000 | |
101 | V | H | 0.2993 | |
102 | Y | H | 0.0000 | |
103 | F | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | R | H | 0.0000 | |
107 | R | H | -0.3904 | |
108 | G | H | 0.0000 | |
109 | N | H | -1.4754 | |
110 | G | H | -0.6282 | |
113 | T | H | -0.4567 | |
114 | G | H | 0.0000 | |
115 | F | H | 0.0000 | |
116 | A | H | 0.0000 | |
117 | Y | H | 0.1208 | |
118 | W | H | -0.2214 | |
119 | G | H | 0.0000 | |
120 | Q | H | -1.2668 | |
121 | G | H | -0.5707 | |
122 | T | H | 0.0000 | |
123 | L | H | 0.3981 | |
124 | V | H | 0.0000 | |
125 | T | H | -0.0916 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.6791 | |
128 | S | H | -0.8413 | |
1 | D | L | -2.1276 | |
2 | I | L | 0.0000 | |
3 | V | L | 0.6866 | |
4 | L | L | 0.0000 | |
5 | T | L | -0.4190 | |
6 | Q | L | 0.0000 | |
7 | S | L | -0.4555 | |
8 | P | L | -0.3351 | |
9 | A | L | -0.5943 | |
10 | S | L | -0.8813 | |
11 | L | L | -0.6412 | |
12 | A | L | -0.9537 | |
13 | V | L | 0.0000 | |
14 | S | L | -1.7783 | |
15 | L | L | -1.3436 | |
16 | G | L | -1.8885 | |
17 | Q | L | -2.6839 | |
18 | R | L | -2.9662 | |
19 | A | L | 0.0000 | |
20 | T | L | -0.7451 | |
21 | I | L | 0.0000 | |
22 | T | L | -0.6217 | |
23 | C | L | 0.0000 | |
24 | K | L | -1.4886 | |
25 | A | L | 0.0000 | |
26 | G | L | -1.0893 | |
27 | Q | L | -1.7324 | |
28 | S | L | -1.0537 | |
29 | V | L | 0.0000 | |
30 | D | L | -0.8332 | |
31 | Y | L | -0.1734 | |
34 | D | L | -1.7745 | |
35 | G | L | -1.4948 | |
36 | D | L | -1.3109 | |
37 | S | L | 0.0000 | |
38 | Y | L | 0.0633 | |
39 | M | L | 0.0000 | |
40 | N | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | Q | L | -0.7934 | |
44 | Q | L | -1.0889 | |
45 | K | L | -1.3591 | |
46 | P | L | -1.0391 | |
47 | G | L | -1.2978 | |
48 | Q | L | -1.8546 | |
49 | P | L | -1.1981 | |
50 | P | L | 0.0000 | |
51 | K | L | -0.8863 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | 0.2802 | |
56 | V | L | -0.1731 | |
57 | A | L | 0.0000 | |
65 | S | L | -0.5419 | |
66 | N | L | -0.4032 | |
67 | L | L | 0.2324 | |
68 | E | L | 0.0000 | |
69 | S | L | -0.3073 | |
70 | G | L | -0.3883 | |
71 | I | L | -0.0992 | |
72 | P | L | -0.1380 | |
74 | A | L | -0.1998 | |
75 | R | L | -1.0075 | |
76 | F | L | 0.0000 | |
77 | S | L | -0.5442 | |
78 | G | L | -0.4249 | |
79 | S | L | -0.8177 | |
80 | G | L | -1.0318 | |
83 | S | L | -1.2083 | |
84 | G | L | -1.1477 | |
85 | T | L | -1.6377 | |
86 | D | L | -1.9975 | |
87 | F | L | 0.0000 | |
88 | T | L | -0.7261 | |
89 | L | L | 0.0000 | |
90 | N | L | -1.1318 | |
91 | I | L | 0.0000 | |
92 | H | L | -2.4941 | |
93 | P | L | -2.1056 | |
94 | V | L | 0.0000 | |
95 | E | L | -2.5039 | |
96 | E | L | -3.1325 | |
97 | N | L | -2.4623 | |
98 | D | L | 0.0000 | |
99 | A | L | -1.7444 | |
100 | A | L | 0.0000 | |
101 | T | L | -1.1464 | |
102 | Y | L | 0.0000 | |
103 | Y | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | Q | L | 0.0000 | |
106 | Q | L | 0.0000 | |
107 | S | L | 0.0000 | |
108 | Y | L | -0.2780 | |
109 | K | L | -1.9500 | |
114 | D | L | -2.4625 | |
115 | P | L | -1.9583 | |
116 | L | L | 0.0000 | |
117 | T | L | -0.5390 | |
118 | F | L | 0.0740 | |
119 | G | L | 0.0000 | |
120 | Q | L | -1.2194 | |
121 | G | L | 0.0000 | |
122 | T | L | 0.0000 | |
123 | K | L | -1.7451 | |
124 | L | L | 0.0000 | |
125 | E | L | -2.2055 | |
126 | I | L | -1.9408 | |
127 | K | L | -2.1145 |