| Chain sequence(s) |
A: PSQVRQNYHQDAEAAINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKPDRDDWESGLNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETYYLSEQVKSIKELGDHVTNLRKMGAPEAGMAEYLFDKHTLG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:12)
[INFO] Main: Simulation completed successfully. (00:05:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 5 | P | A | -0.6263 | |
| 6 | S | A | -1.0177 | |
| 7 | Q | A | -0.9507 | |
| 8 | V | A | -0.2841 | |
| 9 | R | A | -1.4421 | |
| 10 | Q | A | -1.9602 | |
| 11 | N | A | -2.4590 | |
| 12 | Y | A | 0.0000 | |
| 13 | H | A | -2.2500 | |
| 14 | Q | A | -2.2871 | |
| 15 | D | A | -2.1368 | |
| 16 | A | A | 0.0000 | |
| 17 | E | A | -1.4634 | |
| 18 | A | A | -1.2442 | |
| 19 | A | A | -1.4867 | |
| 20 | I | A | 0.0000 | |
| 21 | N | A | -0.5674 | |
| 22 | R | A | -1.6031 | |
| 23 | Q | A | 0.0000 | |
| 24 | I | A | 0.0000 | |
| 25 | N | A | -0.8154 | |
| 26 | L | A | -0.3562 | |
| 27 | E | A | 0.0000 | |
| 28 | L | A | 0.0000 | |
| 29 | Y | A | -0.2880 | |
| 30 | A | A | 0.0000 | |
| 31 | S | A | 0.0000 | |
| 32 | Y | A | 0.3148 | |
| 33 | V | A | 0.0000 | |
| 34 | Y | A | 0.0000 | |
| 35 | L | A | 0.9610 | |
| 36 | S | A | -0.3269 | |
| 37 | M | A | 0.0000 | |
| 38 | S | A | 0.0000 | |
| 39 | C | A | -0.3460 | |
| 40 | Y | A | 0.0000 | |
| 41 | F | A | 0.0000 | |
| 42 | D | A | -3.1925 | |
| 43 | R | A | -3.1060 | |
| 44 | D | A | -3.3921 | |
| 45 | D | A | -3.0147 | |
| 46 | V | A | -2.1820 | |
| 47 | A | A | -2.1133 | |
| 48 | L | A | -1.8577 | |
| 49 | K | A | -2.6441 | |
| 50 | N | A | -1.9183 | |
| 51 | F | A | 0.0000 | |
| 52 | A | A | 0.0000 | |
| 53 | K | A | -1.9687 | |
| 54 | Y | A | -0.9632 | |
| 55 | F | A | 0.0000 | |
| 56 | L | A | -0.4642 | |
| 57 | H | A | -1.8741 | |
| 58 | Q | A | -1.7615 | |
| 59 | S | A | 0.0000 | |
| 60 | H | A | -2.7053 | |
| 61 | E | A | -3.6220 | |
| 62 | E | A | 0.0000 | |
| 63 | R | A | -3.0956 | |
| 64 | E | A | -3.7424 | |
| 65 | H | A | -2.2894 | |
| 66 | A | A | 0.0000 | |
| 67 | E | A | -2.9243 | |
| 68 | K | A | -2.1458 | |
| 69 | L | A | 0.0000 | |
| 70 | M | A | -1.8171 | |
| 71 | K | A | -2.6898 | |
| 72 | L | A | 0.0000 | |
| 73 | Q | A | 0.0000 | |
| 74 | N | A | -2.3823 | |
| 75 | Q | A | -2.1538 | |
| 76 | R | A | 0.0000 | |
| 77 | G | A | 0.0000 | |
| 78 | G | A | 0.0000 | |
| 79 | R | A | -1.3698 | |
| 80 | I | A | 0.1948 | |
| 81 | F | A | 1.8395 | |
| 82 | L | A | 1.0202 | |
| 83 | Q | A | -1.3254 | |
| 84 | D | A | -2.5423 | |
| 85 | I | A | -1.5612 | |
| 86 | K | A | -3.0402 | |
| 87 | K | A | -3.2424 | |
| 88 | P | A | -2.4220 | |
| 89 | D | A | -3.3196 | |
| 90 | R | A | -3.3060 | |
| 91 | D | A | -3.3942 | |
| 92 | D | A | -2.8500 | |
| 93 | W | A | 0.0000 | |
| 94 | E | A | -2.5397 | |
| 95 | S | A | -1.4476 | |
| 96 | G | A | 0.0000 | |
| 97 | L | A | 0.0000 | |
| 98 | N | A | -1.0126 | |
| 99 | A | A | 0.0000 | |
| 100 | M | A | 0.0000 | |
| 101 | E | A | -0.9066 | |
| 102 | C | A | -0.6559 | |
| 103 | A | A | 0.0000 | |
| 104 | L | A | -1.1824 | |
| 105 | H | A | -1.4721 | |
| 106 | L | A | 0.0000 | |
| 107 | E | A | 0.0000 | |
| 108 | K | A | -1.6948 | |
| 109 | S | A | -1.3528 | |
| 110 | V | A | 0.0000 | |
| 111 | N | A | -1.1560 | |
| 112 | Q | A | -1.7403 | |
| 113 | S | A | -1.6155 | |
| 114 | L | A | 0.0000 | |
| 115 | L | A | -1.2044 | |
| 116 | E | A | -2.3663 | |
| 117 | L | A | 0.0000 | |
| 118 | H | A | -2.1429 | |
| 119 | K | A | -2.8272 | |
| 120 | L | A | -2.2606 | |
| 121 | A | A | 0.0000 | |
| 122 | T | A | -2.4458 | |
| 123 | D | A | -2.9301 | |
| 124 | K | A | -2.9825 | |
| 125 | N | A | -2.7267 | |
| 126 | D | A | 0.0000 | |
| 127 | P | A | -1.6685 | |
| 128 | H | A | -1.8950 | |
| 129 | L | A | 0.0000 | |
| 130 | C | A | -1.9711 | |
| 131 | D | A | -2.5322 | |
| 132 | F | A | 0.0000 | |
| 133 | I | A | 0.0000 | |
| 134 | E | A | -2.2024 | |
| 135 | T | A | -1.1963 | |
| 136 | Y | A | -0.4490 | |
| 137 | Y | A | 0.0000 | |
| 138 | L | A | -0.6782 | |
| 139 | S | A | -0.8342 | |
| 140 | E | A | -1.7318 | |
| 141 | Q | A | 0.0000 | |
| 142 | V | A | -0.2054 | |
| 143 | K | A | -2.1334 | |
| 144 | S | A | -1.7623 | |
| 145 | I | A | -1.5624 | |
| 146 | K | A | -2.6017 | |
| 147 | E | A | -2.3148 | |
| 148 | L | A | 0.0000 | |
| 149 | G | A | -1.8902 | |
| 150 | D | A | -2.1926 | |
| 151 | H | A | -1.7059 | |
| 152 | V | A | 0.0000 | |
| 153 | T | A | -1.7527 | |
| 154 | N | A | -1.8070 | |
| 155 | L | A | 0.0000 | |
| 156 | R | A | -3.0755 | |
| 157 | K | A | -2.5780 | |
| 158 | M | A | -1.2554 | |
| 159 | G | A | -1.6122 | |
| 160 | A | A | 0.0000 | |
| 161 | P | A | -1.6985 | |
| 162 | E | A | -2.1251 | |
| 163 | A | A | -0.9590 | |
| 164 | G | A | -0.2921 | |
| 165 | M | A | 0.9597 | |
| 166 | A | A | 0.0000 | |
| 167 | E | A | -0.1584 | |
| 168 | Y | A | 0.6180 | |
| 169 | L | A | 0.3456 | |
| 170 | F | A | 0.0000 | |
| 171 | D | A | -0.9059 | |
| 172 | K | A | -1.7978 | |
| 173 | H | A | -1.5411 | |
| 174 | T | A | -0.9282 | |
| 175 | L | A | -1.1034 | |
| 176 | G | A | -1.5713 |