| Chain sequence(s) |
A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFNIAYWEPGIGGEAIWLRVPGSERSYDLTGLKPGTEYKVWIHGVKGGASSAPLIARFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:45)
[INFO] Main: Simulation completed successfully. (00:00:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.1108 | |
| 2 | L | A | 0.5039 | |
| 3 | P | A | -0.1473 | |
| 4 | A | A | -0.4430 | |
| 5 | P | A | 0.0000 | |
| 6 | K | A | -2.0733 | |
| 7 | N | A | -1.2468 | |
| 8 | L | A | 0.2550 | |
| 9 | V | A | 0.9642 | |
| 10 | V | A | 0.0347 | |
| 11 | S | A | -0.6099 | |
| 12 | R | A | -2.0032 | |
| 13 | V | A | -1.0208 | |
| 14 | T | A | -1.8021 | |
| 15 | E | A | -3.0728 | |
| 16 | D | A | -2.7856 | |
| 17 | S | A | -2.0873 | |
| 18 | A | A | 0.0000 | |
| 19 | R | A | -1.2014 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.3795 | |
| 22 | W | A | 0.0000 | |
| 23 | T | A | -1.3167 | |
| 24 | A | A | -1.4422 | |
| 25 | P | A | -1.4110 | |
| 26 | D | A | -2.2804 | |
| 27 | A | A | -1.4413 | |
| 28 | A | A | -1.1874 | |
| 29 | F | A | 0.0000 | |
| 30 | D | A | -2.5723 | |
| 31 | S | A | 0.0000 | |
| 32 | F | A | 0.0000 | |
| 33 | N | A | -0.6279 | |
| 34 | I | A | 0.0000 | |
| 35 | A | A | 0.0000 | |
| 36 | Y | A | 0.4488 | |
| 37 | W | A | -0.2915 | |
| 38 | E | A | -1.0158 | |
| 39 | P | A | -0.7551 | |
| 40 | G | A | 0.0945 | |
| 41 | I | A | 1.2338 | |
| 42 | G | A | -0.1519 | |
| 43 | G | A | -0.4793 | |
| 44 | E | A | -1.3442 | |
| 45 | A | A | -0.1986 | |
| 46 | I | A | 0.8764 | |
| 47 | W | A | 0.9218 | |
| 48 | L | A | 0.0432 | |
| 49 | R | A | -1.6084 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.5436 | |
| 52 | G | A | 0.0000 | |
| 53 | S | A | -1.6295 | |
| 54 | E | A | -1.7223 | |
| 55 | R | A | -1.1668 | |
| 56 | S | A | -0.6461 | |
| 57 | Y | A | -0.7137 | |
| 58 | D | A | -1.6010 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -1.3483 | |
| 61 | G | A | -1.5153 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -3.0863 | |
| 64 | P | A | -2.6648 | |
| 65 | G | A | -1.9630 | |
| 66 | T | A | -2.0811 | |
| 67 | E | A | -2.5978 | |
| 68 | Y | A | 0.0000 | |
| 69 | K | A | -0.9424 | |
| 70 | V | A | 0.0000 | |
| 71 | W | A | 1.0357 | |
| 72 | I | A | 0.0000 | |
| 73 | H | A | -0.1713 | |
| 74 | G | A | 0.0000 | |
| 75 | V | A | -1.2723 | |
| 76 | K | A | -1.7929 | |
| 77 | G | A | -1.4623 | |
| 78 | G | A | -1.1694 | |
| 79 | A | A | -0.5861 | |
| 80 | S | A | -0.2854 | |
| 81 | S | A | 0.0000 | |
| 82 | A | A | 0.4278 | |
| 83 | P | A | 0.3079 | |
| 84 | L | A | 0.8334 | |
| 85 | I | A | 1.5338 | |
| 86 | A | A | 0.2447 | |
| 87 | R | A | -1.6727 | |
| 88 | F | A | 0.0000 | |
| 89 | T | A | -1.8060 | |
| 90 | T | A | -2.0336 |