Project name: query_structure

Status: done

Started: 2026-03-16 21:44:40
Settings
Chain sequence(s) A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFNIAYWEPGIGGEAIWLRVPGSERSYDLTGLKPGTEYKVWIHGVKGGASSAPLIARFTT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:45)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:46)
Show buried residues

Minimal score value
-3.0863
Maximal score value
1.5338
Average score
-0.7067
Total score value
-63.6006

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 1.1108
2 L A 0.5039
3 P A -0.1473
4 A A -0.4430
5 P A 0.0000
6 K A -2.0733
7 N A -1.2468
8 L A 0.2550
9 V A 0.9642
10 V A 0.0347
11 S A -0.6099
12 R A -2.0032
13 V A -1.0208
14 T A -1.8021
15 E A -3.0728
16 D A -2.7856
17 S A -2.0873
18 A A 0.0000
19 R A -1.2014
20 L A 0.0000
21 S A -0.3795
22 W A 0.0000
23 T A -1.3167
24 A A -1.4422
25 P A -1.4110
26 D A -2.2804
27 A A -1.4413
28 A A -1.1874
29 F A 0.0000
30 D A -2.5723
31 S A 0.0000
32 F A 0.0000
33 N A -0.6279
34 I A 0.0000
35 A A 0.0000
36 Y A 0.4488
37 W A -0.2915
38 E A -1.0158
39 P A -0.7551
40 G A 0.0945
41 I A 1.2338
42 G A -0.1519
43 G A -0.4793
44 E A -1.3442
45 A A -0.1986
46 I A 0.8764
47 W A 0.9218
48 L A 0.0432
49 R A -1.6084
50 V A 0.0000
51 P A -1.5436
52 G A 0.0000
53 S A -1.6295
54 E A -1.7223
55 R A -1.1668
56 S A -0.6461
57 Y A -0.7137
58 D A -1.6010
59 L A 0.0000
60 T A -1.3483
61 G A -1.5153
62 L A 0.0000
63 K A -3.0863
64 P A -2.6648
65 G A -1.9630
66 T A -2.0811
67 E A -2.5978
68 Y A 0.0000
69 K A -0.9424
70 V A 0.0000
71 W A 1.0357
72 I A 0.0000
73 H A -0.1713
74 G A 0.0000
75 V A -1.2723
76 K A -1.7929
77 G A -1.4623
78 G A -1.1694
79 A A -0.5861
80 S A -0.2854
81 S A 0.0000
82 A A 0.4278
83 P A 0.3079
84 L A 0.8334
85 I A 1.5338
86 A A 0.2447
87 R A -1.6727
88 F A 0.0000
89 T A -1.8060
90 T A -2.0336
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Laboratory of Theory of Biopolymers 2018