| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPQHCGADDRVNFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRCGPDGHPLPAAPPPSPLYVPPPPTSPYAVLPPRDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPPINVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.8814 | |
| 2 | L | A | 1.8384 | |
| 3 | P | A | 0.5874 | |
| 4 | P | A | 0.1540 | |
| 5 | T | A | 0.0124 | |
| 6 | T | A | -0.0236 | |
| 7 | P | A | 0.2985 | |
| 8 | V | A | 1.1963 | |
| 9 | A | A | -0.0338 | |
| 10 | K | A | -1.1354 | |
| 11 | V | A | -0.4180 | |
| 12 | Q | A | -1.5342 | |
| 13 | S | A | -1.6065 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4222 | |
| 16 | E | A | -2.4411 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4589 | |
| 20 | P | A | 0.1066 | |
| 21 | T | A | 0.1164 | |
| 22 | S | A | -0.1702 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1054 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1821 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7516 | |
| 31 | R | A | -2.6737 | |
| 32 | L | A | -0.8175 | |
| 33 | L | A | 1.0727 | |
| 34 | T | A | 1.2793 | |
| 35 | V | A | 1.7216 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2543 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6031 | |
| 40 | K | A | -1.6181 | |
| 41 | D | A | -0.8939 | |
| 42 | I | A | 0.8334 | |
| 43 | V | A | 1.0218 | |
| 44 | K | A | -1.1889 | |
| 45 | N | A | -1.9283 | |
| 46 | G | A | -1.2342 | |
| 47 | K | A | -0.9435 | |
| 48 | V | A | 1.5056 | |
| 49 | V | A | 2.0621 | |
| 50 | V | A | 1.2805 | |
| 51 | P | A | 0.4735 | |
| 52 | K | A | -0.6285 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1302 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4703 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2914 | |
| 70 | K | A | -1.8087 | |
| 71 | F | A | -0.6657 | |
| 72 | A | A | -0.5710 | |
| 73 | L | A | -0.8604 | |
| 74 | P | A | -1.2608 | |
| 75 | Q | A | -2.4782 | |
| 76 | K | A | -3.0963 | |
| 77 | D | A | -2.9929 | |
| 78 | F | A | -1.6424 | |
| 79 | Y | A | -1.9237 | |
| 80 | D | A | -2.7703 | |
| 81 | P | A | -2.3628 | |
| 82 | E | A | -3.0798 | |
| 83 | K | A | -3.4493 | |
| 84 | E | A | -2.5126 | |
| 85 | R | A | -1.3187 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6589 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9858 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3982 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7968 | |
| 99 | G | A | -0.5642 | |
| 100 | P | A | -0.4089 | |
| 101 | L | A | 0.0056 | |
| 102 | G | A | -0.2372 | |
| 103 | K | A | -0.6728 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4517 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.1060 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.1878 | |
| 110 | L | A | -0.1710 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.2630 | |
| 113 | K | A | -0.5593 | |
| 114 | L | A | -0.9164 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.5018 | |
| 117 | T | A | -1.3719 | |
| 118 | E | A | -2.5506 | |
| 119 | N | A | -2.4106 | |
| 120 | P | A | -1.6925 | |
| 121 | T | A | -0.8805 | |
| 122 | A | A | -0.6127 | |
| 123 | P | A | -0.1703 | |
| 124 | Q | A | -0.8952 | |
| 125 | H | A | -0.6601 | |
| 126 | C | A | -0.9576 | |
| 127 | G | A | -1.3598 | |
| 128 | A | A | -1.1981 | |
| 129 | D | A | -2.2152 | |
| 130 | D | A | -1.7646 | |
| 131 | R | A | -1.4696 | |
| 132 | V | A | -0.4971 | |
| 133 | N | A | -0.9124 | |
| 134 | F | A | -0.3966 | |
| 135 | S | A | -0.3672 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6939 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5681 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2395 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1314 | |
| 157 | D | A | 0.3104 | |
| 158 | L | A | 0.7725 | |
| 159 | A | A | 0.1414 | |
| 160 | E | A | -1.4559 | |
| 161 | P | A | -0.2131 | |
| 162 | C | A | 0.1897 | |
| 163 | P | A | -0.1665 | |
| 164 | G | A | -0.0714 | |
| 165 | L | A | 0.5901 | |
| 166 | P | A | -0.1148 | |
| 167 | P | A | -0.3409 | |
| 168 | G | A | -0.4165 | |
| 169 | A | A | -0.0130 | |
| 170 | C | A | 0.6674 | |
| 171 | P | A | 0.5205 | |
| 172 | P | A | 0.7495 | |
| 173 | I | A | 1.9204 | |
| 174 | Q | A | 0.8039 | |
| 175 | L | A | 1.4619 | |
| 176 | V | A | 0.8239 | |
| 177 | N | A | -0.3516 | |
| 178 | S | A | 0.0090 | |
| 179 | V | A | 0.4000 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3642 | |
| 182 | D | A | 0.0687 | |
| 183 | G | A | -0.1622 | |
| 184 | D | A | -0.5445 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1532 | |
| 190 | F | A | 0.0587 | |
| 191 | G | A | -0.1073 | |
| 192 | N | A | -0.2575 | |
| 193 | M | A | -0.1180 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3857 | |
| 197 | E | A | -2.5901 | |
| 198 | L | A | -1.2280 | |
| 199 | Q | A | -2.5467 | |
| 200 | Q | A | -3.3357 | |
| 201 | D | A | -3.6040 | |
| 202 | R | A | -3.3433 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2004 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3615 | |
| 211 | S | A | -1.8798 | |
| 212 | T | A | -1.4190 | |
| 213 | R | A | -2.0536 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1686 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2870 | |
| 220 | L | A | 0.4904 | |
| 221 | K | A | -1.3321 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9745 | |
| 224 | N | A | -1.7027 | |
| 225 | E | A | -1.3262 | |
| 226 | A | A | -0.6701 | |
| 227 | Y | A | -0.4543 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7171 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1374 | |
| 234 | F | A | 0.0364 | |
| 235 | G | A | -0.8834 | |
| 236 | R | A | -2.5960 | |
| 237 | R | A | -2.7678 | |
| 238 | E | A | -2.0491 | |
| 239 | Q | A | -0.0735 | |
| 240 | V | A | 1.5740 | |
| 241 | Y | A | 1.2510 | |
| 242 | A | A | 0.1307 | |
| 243 | R | A | -1.2237 | |
| 244 | H | A | -1.2475 | |
| 245 | F | A | -0.2837 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.7024 | |
| 249 | C | A | -1.0552 | |
| 250 | G | A | -0.9889 | |
| 251 | P | A | -1.0029 | |
| 252 | D | A | -1.4721 | |
| 253 | G | A | -1.3959 | |
| 254 | H | A | -1.5655 | |
| 255 | P | A | -0.8608 | |
| 256 | L | A | 0.1953 | |
| 257 | P | A | -0.0262 | |
| 258 | A | A | -0.0623 | |
| 259 | A | A | 0.2737 | |
| 260 | P | A | -0.2292 | |
| 261 | P | A | 0.0140 | |
| 262 | P | A | 0.0503 | |
| 263 | S | A | 0.6061 | |
| 264 | P | A | 0.6810 | |
| 265 | L | A | 1.8686 | |
| 266 | Y | A | 1.7205 | |
| 267 | V | A | 1.9240 | |
| 268 | P | A | 1.1691 | |
| 269 | P | A | 0.6989 | |
| 270 | P | A | -0.1157 | |
| 271 | P | A | -0.0685 | |
| 272 | T | A | -0.1828 | |
| 273 | S | A | 0.2787 | |
| 274 | P | A | 0.4375 | |
| 275 | Y | A | 1.4587 | |
| 276 | A | A | 1.3239 | |
| 277 | V | A | 2.2262 | |
| 278 | L | A | 1.5196 | |
| 279 | P | A | 0.2218 | |
| 280 | P | A | -0.5603 | |
| 281 | R | A | -0.8689 | |
| 282 | D | A | -1.3235 | |
| 283 | Y | A | 0.6112 | |
| 284 | F | A | 0.5824 | |
| 285 | G | A | 0.0203 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9432 | |
| 291 | L | A | 1.6460 | |
| 292 | V | A | 0.6572 | |
| 293 | S | A | -0.1403 | |
| 294 | S | A | -0.9654 | |
| 295 | D | A | -1.8359 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0973 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6587 | |
| 301 | R | A | -1.8751 | |
| 302 | P | A | -0.9631 | |
| 303 | F | A | -0.1942 | |
| 304 | W | A | -0.5251 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0859 | |
| 307 | R | A | -2.9246 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7809 | |
| 310 | G | A | -1.4155 | |
| 311 | N | A | -1.3942 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9329 | |
| 319 | N | A | -0.8907 | |
| 320 | E | A | -1.0516 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3958 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1194 | |
| 333 | N | A | 0.5042 | |
| 334 | F | A | 1.7118 | |
| 335 | T | A | 0.8641 | |
| 336 | I | A | 0.4021 | |
| 337 | S | A | -0.9096 | |
| 338 | Q | A | -1.5603 | |
| 339 | Q | A | -0.9073 | |
| 340 | L | A | 0.5223 | |
| 341 | S | A | 0.1899 | |
| 342 | T | A | -0.0916 | |
| 343 | P | A | -0.3881 | |
| 344 | P | A | -0.3406 | |
| 345 | I | A | 0.2983 | |
| 346 | N | A | -0.0685 | |
| 347 | V | A | 1.6615 | |
| 348 | Y | A | 1.4967 | |
| 349 | D | A | -0.0923 | |
| 350 | P | A | -0.6982 | |
| 351 | S | A | -0.5371 | |
| 352 | N | A | -0.2714 | |
| 353 | F | A | -0.8605 | |
| 354 | K | A | -1.8578 | |
| 355 | N | A | -1.7574 | |
| 356 | Y | A | -0.1200 | |
| 357 | L | A | 0.6400 | |
| 358 | R | A | 0.9056 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.1407 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.2433 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0732 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.7001 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3107 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3310 | |
| 376 | L | A | -1.7744 | |
| 377 | D | A | -2.0319 | |
| 378 | P | A | -0.8651 | |
| 379 | G | A | -0.8771 | |
| 380 | V | A | -0.8725 | |
| 381 | L | A | -0.2508 | |
| 382 | A | A | -0.0778 | |
| 383 | H | A | -0.6183 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -0.5938 | |
| 386 | T | A | -0.4044 | |
| 387 | M | A | -0.1796 | |
| 388 | N | A | -0.7090 | |
| 389 | P | A | -1.0770 | |
| 390 | T | A | -1.4940 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4657 | |
| 393 | E | A | -2.9330 | |
| 394 | N | A | -2.7510 | |
| 395 | W | A | -1.5755 | |
| 396 | N | A | -1.4602 | |
| 397 | L | A | -0.2578 | |
| 398 | G | A | 0.5028 | |
| 399 | F | A | 2.4079 | |
| 400 | V | A | 1.8429 | |
| 401 | P | A | 0.0537 | |
| 402 | P | A | -1.9539 | |
| 403 | K | A | -3.5937 | |
| 404 | E | A | -3.9868 | |
| 405 | R | A | -4.4031 | |
| 406 | E | A | -3.9902 | |
| 407 | D | A | -2.9697 | |
| 408 | P | A | -1.8160 | |
| 409 | Y | A | -0.9939 | |
| 410 | K | A | -2.1031 | |
| 411 | G | A | -0.6360 | |
| 412 | L | A | 0.6643 | |
| 413 | I | A | 1.5741 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4158 | |
| 416 | E | A | -1.7072 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8562 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8978 | |
| 421 | E | A | -2.5109 | |
| 422 | R | A | -2.0897 | |
| 423 | F | A | -1.0332 | |
| 424 | S | A | -1.3296 | |
| 425 | Q | A | -1.8611 | |
| 426 | D | A | -2.8924 | |
| 427 | L | A | -1.9829 | |
| 428 | D | A | -2.7670 | |
| 429 | Q | A | -2.6050 | |
| 430 | F | A | -1.4242 | |
| 431 | A | A | -0.8741 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5107 | |
| 435 | K | A | -0.6779 | |
| 436 | F | A | 0.1767 | |
| 437 | L | A | 1.0558 | |
| 438 | Y | A | 0.8462 | |
| 439 | Q | A | -0.2547 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine