| Chain sequence(s) |
A: CDLSCPSNKVCVIENGKQTCKCSERFVLENGVCICANDYKMEDGINCIAKNKCKRKEYENICTNPNEMCAYNEETDIVKCECKEHYYRSSRGECILNDYCKDINCKENEECSIVNFKPECVCKENLKKNNKGECIYENSCLINEGNCPKDSKCIYREYKPHECVCNKQGHVAVNGKCVLEDKCVHNKKCSENSICVNVMNKEPICVCTYNYYKKDGGGGSGGGGSESQVRQQFSKDIEKLLNEQVNKEMQSSNLYMSMSSWCYTHSLDGAGLFLFDHAAEEYEHAKKLIIFLNENNVPVQLTSISAPEHKFEGLTQIFQKAYEHEQHISESINNIVDHAIKSKDHATFNFLQWYVAEQHEEEVLFKDILDKIELIGNENHGLYLADQYVKGIAKSRKS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:09:40)
[INFO] Main: Simulation completed successfully. (00:09:43)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.5346 | |
| 2 | D | A | -0.8949 | |
| 3 | L | A | 0.4383 | |
| 4 | S | A | 0.0068 | |
| 5 | C | A | 0.0845 | |
| 6 | P | A | -0.0308 | |
| 7 | S | A | -0.0579 | |
| 8 | N | A | -0.0757 | |
| 9 | K | A | -0.1380 | |
| 10 | V | A | 0.8666 | |
| 11 | C | A | 0.6358 | |
| 12 | V | A | 0.6146 | |
| 13 | I | A | 0.5585 | |
| 14 | E | A | -1.5301 | |
| 15 | N | A | -2.0972 | |
| 16 | G | A | -1.7536 | |
| 17 | K | A | -2.0950 | |
| 18 | Q | A | -0.8878 | |
| 19 | T | A | -0.4982 | |
| 20 | C | A | 0.0742 | |
| 21 | K | A | -0.6127 | |
| 22 | C | A | -0.1190 | |
| 23 | S | A | -0.6548 | |
| 24 | E | A | -1.9207 | |
| 25 | R | A | -1.5707 | |
| 26 | F | A | 0.0000 | |
| 27 | V | A | 0.6668 | |
| 28 | L | A | 1.2033 | |
| 29 | E | A | -0.8227 | |
| 30 | N | A | -1.2860 | |
| 31 | G | A | -0.1718 | |
| 32 | V | A | 1.3654 | |
| 33 | C | A | 0.0000 | |
| 34 | I | A | 1.1629 | |
| 35 | C | A | -0.2607 | |
| 36 | A | A | -0.9789 | |
| 37 | N | A | -1.9096 | |
| 38 | D | A | -2.5264 | |
| 39 | Y | A | -1.8696 | |
| 40 | K | A | -2.0902 | |
| 41 | M | A | -1.0419 | |
| 42 | E | A | -2.3476 | |
| 43 | D | A | -2.3788 | |
| 44 | G | A | -1.1227 | |
| 45 | I | A | 0.3817 | |
| 46 | N | A | -1.1454 | |
| 47 | C | A | 0.0000 | |
| 48 | I | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | K | A | -2.3856 | |
| 51 | N | A | -2.0641 | |
| 52 | K | A | -2.1306 | |
| 53 | C | A | -1.8233 | |
| 54 | K | A | -3.1614 | |
| 55 | R | A | -3.1053 | |
| 56 | K | A | -3.7231 | |
| 57 | E | A | -3.4169 | |
| 58 | Y | A | -2.5029 | |
| 59 | E | A | -3.4679 | |
| 60 | N | A | -2.3307 | |
| 61 | I | A | -0.4558 | |
| 62 | C | A | -0.3428 | |
| 63 | T | A | -1.0504 | |
| 64 | N | A | -1.2546 | |
| 65 | P | A | -1.2857 | |
| 66 | N | A | -0.9284 | |
| 67 | E | A | -1.0701 | |
| 68 | M | A | -0.7659 | |
| 69 | C | A | -0.6411 | |
| 70 | A | A | -0.5236 | |
| 71 | Y | A | -1.1306 | |
| 72 | N | A | -1.9414 | |
| 73 | E | A | -3.2779 | |
| 74 | E | A | -3.0103 | |
| 75 | T | A | -1.6594 | |
| 76 | D | A | -2.1533 | |
| 77 | I | A | 0.3029 | |
| 78 | V | A | 0.2014 | |
| 79 | K | A | -0.3728 | |
| 80 | C | A | -0.4670 | |
| 81 | E | A | -1.5104 | |
| 82 | C | A | -1.3084 | |
| 83 | K | A | -1.6249 | |
| 84 | E | A | -1.8866 | |
| 85 | H | A | -0.6267 | |
| 86 | Y | A | -0.3140 | |
| 87 | Y | A | -0.1890 | |
| 88 | R | A | -1.6404 | |
| 89 | S | A | -1.2869 | |
| 90 | S | A | -1.6544 | |
| 91 | R | A | -2.7085 | |
| 92 | G | A | -2.0007 | |
| 93 | E | A | -2.0567 | |
| 94 | C | A | 0.0000 | |
| 95 | I | A | 0.6465 | |
| 96 | L | A | 0.6749 | |
| 97 | N | A | -0.3296 | |
| 98 | D | A | -1.5210 | |
| 99 | Y | A | -1.1151 | |
| 100 | C | A | -2.0235 | |
| 101 | K | A | -2.8463 | |
| 102 | D | A | -2.5899 | |
| 103 | I | A | -1.7007 | |
| 104 | N | A | -2.3332 | |
| 105 | C | A | -2.2588 | |
| 106 | K | A | -2.9784 | |
| 107 | E | A | -3.2595 | |
| 108 | N | A | 0.0000 | |
| 109 | E | A | 0.0000 | |
| 110 | E | A | -2.7599 | |
| 111 | C | A | -1.5303 | |
| 112 | S | A | -0.2271 | |
| 113 | I | A | 0.4510 | |
| 114 | V | A | 0.7718 | |
| 115 | N | A | -0.3772 | |
| 116 | F | A | 0.4439 | |
| 117 | K | A | -0.9297 | |
| 118 | P | A | -1.0586 | |
| 119 | E | A | -1.0943 | |
| 120 | C | A | -1.0209 | |
| 121 | V | A | -0.8421 | |
| 122 | C | A | -2.2481 | |
| 123 | K | A | -2.7186 | |
| 124 | E | A | -3.0819 | |
| 125 | N | A | -2.8663 | |
| 126 | L | A | -2.7665 | |
| 127 | K | A | -3.2069 | |
| 128 | K | A | -3.0625 | |
| 129 | N | A | -2.8817 | |
| 130 | N | A | -2.8017 | |
| 131 | K | A | -2.8618 | |
| 132 | G | A | -2.2680 | |
| 133 | E | A | -2.1220 | |
| 134 | C | A | 0.0000 | |
| 135 | I | A | -1.9442 | |
| 136 | Y | A | -2.5479 | |
| 137 | E | A | -2.5526 | |
| 138 | N | A | -1.0556 | |
| 139 | S | A | -0.6198 | |
| 140 | C | A | -0.4318 | |
| 141 | L | A | 1.1480 | |
| 142 | I | A | 1.0313 | |
| 143 | N | A | -1.1601 | |
| 144 | E | A | -2.0869 | |
| 145 | G | A | 0.0000 | |
| 146 | N | A | -2.5847 | |
| 147 | C | A | -2.5409 | |
| 148 | P | A | 0.0000 | |
| 149 | K | A | -3.7958 | |
| 150 | D | A | -3.8043 | |
| 151 | S | A | -3.0897 | |
| 152 | K | A | -2.5423 | |
| 153 | C | A | -1.1650 | |
| 154 | I | A | -0.1065 | |
| 155 | Y | A | -0.8330 | |
| 156 | R | A | -1.5036 | |
| 157 | E | A | -1.9752 | |
| 158 | Y | A | -1.1488 | |
| 159 | K | A | -1.9405 | |
| 160 | P | A | -1.5614 | |
| 161 | H | A | -1.5482 | |
| 162 | E | A | -0.6691 | |
| 163 | C | A | -1.0978 | |
| 164 | V | A | -0.3085 | |
| 165 | C | A | -1.8116 | |
| 166 | N | A | -3.1463 | |
| 167 | K | A | -2.7981 | |
| 168 | Q | A | -2.2255 | |
| 169 | G | A | -1.2553 | |
| 170 | H | A | -0.6528 | |
| 171 | V | A | 0.0183 | |
| 172 | A | A | -0.6110 | |
| 173 | V | A | 0.0546 | |
| 174 | N | A | -1.5141 | |
| 175 | G | A | -2.1394 | |
| 176 | K | A | -2.2543 | |
| 177 | C | A | 0.0000 | |
| 178 | V | A | 0.5340 | |
| 179 | L | A | 0.5930 | |
| 180 | E | A | -0.6210 | |
| 181 | D | A | -1.0417 | |
| 182 | K | A | -2.1315 | |
| 183 | C | A | -0.8880 | |
| 184 | V | A | -0.0228 | |
| 185 | H | A | -1.4338 | |
| 186 | N | A | -2.4343 | |
| 187 | K | A | -2.6704 | |
| 188 | K | A | -2.6993 | |
| 189 | C | A | -1.0766 | |
| 190 | S | A | -1.5577 | |
| 191 | E | A | -2.4028 | |
| 192 | N | A | -0.9618 | |
| 193 | S | A | 0.6827 | |
| 194 | I | A | 1.6412 | |
| 195 | C | A | 0.8180 | |
| 196 | V | A | 1.3081 | |
| 197 | N | A | -0.5913 | |
| 198 | V | A | -0.2783 | |
| 199 | M | A | -0.2418 | |
| 200 | N | A | -1.9361 | |
| 201 | K | A | -2.7041 | |
| 202 | E | A | -2.8785 | |
| 203 | P | A | -1.1832 | |
| 204 | I | A | 0.7260 | |
| 205 | C | A | 0.5151 | |
| 206 | V | A | 1.7945 | |
| 207 | C | A | 1.0778 | |
| 208 | T | A | 0.8166 | |
| 209 | Y | A | 1.2659 | |
| 210 | N | A | 0.1972 | |
| 211 | Y | A | 1.1479 | |
| 212 | Y | A | 0.4981 | |
| 213 | K | A | -2.0863 | |
| 214 | K | A | -3.1382 | |
| 215 | D | A | -3.3716 | |
| 216 | G | A | -2.4795 | |
| 217 | G | A | -2.0520 | |
| 218 | G | A | -1.4167 | |
| 219 | G | A | -1.2105 | |
| 220 | S | A | -1.0357 | |
| 221 | G | A | -1.2334 | |
| 222 | G | A | -1.2250 | |
| 223 | G | A | -1.4425 | |
| 224 | G | A | -1.5556 | |
| 225 | S | A | -1.7505 | |
| 226 | E | A | -2.4463 | |
| 227 | S | A | -1.8333 | |
| 228 | Q | A | -2.0685 | |
| 229 | V | A | -0.9158 | |
| 230 | R | A | -2.6097 | |
| 231 | Q | A | -2.7120 | |
| 232 | Q | A | -2.2224 | |
| 233 | F | A | 0.0000 | |
| 234 | S | A | -2.7417 | |
| 235 | K | A | -3.4672 | |
| 236 | D | A | -3.3790 | |
| 237 | I | A | 0.0000 | |
| 238 | E | A | -2.8309 | |
| 239 | K | A | -3.4044 | |
| 240 | L | A | -2.1163 | |
| 241 | L | A | 0.0000 | |
| 242 | N | A | 0.0000 | |
| 243 | E | A | -1.9292 | |
| 244 | Q | A | 0.0000 | |
| 245 | V | A | 0.0000 | |
| 246 | N | A | -0.5842 | |
| 247 | K | A | -1.3633 | |
| 248 | E | A | 0.0000 | |
| 249 | M | A | -0.2576 | |
| 250 | Q | A | -0.3631 | |
| 251 | S | A | 0.0000 | |
| 252 | S | A | 0.0000 | |
| 253 | N | A | -0.1863 | |
| 254 | L | A | 0.0000 | |
| 255 | Y | A | 0.0000 | |
| 256 | M | A | 0.4808 | |
| 257 | S | A | -0.5726 | |
| 258 | M | A | 0.0000 | |
| 259 | S | A | 0.0000 | |
| 260 | S | A | 0.0611 | |
| 261 | W | A | -0.8223 | |
| 262 | C | A | 0.0000 | |
| 263 | Y | A | 0.0335 | |
| 264 | T | A | -0.3986 | |
| 265 | H | A | -0.9301 | |
| 266 | S | A | -0.5469 | |
| 267 | L | A | 0.0000 | |
| 268 | D | A | -1.2652 | |
| 269 | G | A | 0.0000 | |
| 270 | A | A | 0.0000 | |
| 271 | G | A | 0.0000 | |
| 272 | L | A | 0.1963 | |
| 273 | F | A | 0.0000 | |
| 274 | L | A | 0.0000 | |
| 275 | F | A | 1.6402 | |
| 276 | D | A | -0.0168 | |
| 277 | H | A | 0.0000 | |
| 278 | A | A | 0.0000 | |
| 279 | A | A | -0.1167 | |
| 280 | E | A | -0.9605 | |
| 281 | E | A | 0.0000 | |
| 282 | Y | A | -0.8354 | |
| 283 | E | A | -2.2778 | |
| 284 | H | A | 0.0000 | |
| 285 | A | A | 0.0000 | |
| 286 | K | A | -1.7154 | |
| 287 | K | A | -1.1784 | |
| 288 | L | A | 0.0000 | |
| 289 | I | A | -0.3484 | |
| 290 | I | A | -0.0143 | |
| 291 | F | A | -0.4423 | |
| 292 | L | A | 0.0000 | |
| 293 | N | A | -1.8256 | |
| 294 | E | A | -2.2385 | |
| 295 | N | A | -1.5842 | |
| 296 | N | A | -1.4989 | |
| 297 | V | A | 0.0000 | |
| 298 | P | A | -0.8175 | |
| 299 | V | A | -0.3044 | |
| 300 | Q | A | -0.7889 | |
| 301 | L | A | 0.9304 | |
| 302 | T | A | 0.1929 | |
| 303 | S | A | 0.3031 | |
| 304 | I | A | 0.6364 | |
| 305 | S | A | -0.0767 | |
| 306 | A | A | -0.4144 | |
| 307 | P | A | -1.1231 | |
| 308 | E | A | -2.3281 | |
| 309 | H | A | -2.3689 | |
| 310 | K | A | -2.8909 | |
| 311 | F | A | -2.1514 | |
| 312 | E | A | -2.4004 | |
| 313 | G | A | -1.4941 | |
| 314 | L | A | 0.0000 | |
| 315 | T | A | -1.3651 | |
| 316 | Q | A | -1.2968 | |
| 317 | I | A | 0.0000 | |
| 318 | F | A | 0.0000 | |
| 319 | Q | A | -1.3865 | |
| 320 | K | A | -1.3280 | |
| 321 | A | A | 0.0000 | |
| 322 | Y | A | -1.2787 | |
| 323 | E | A | -1.9719 | |
| 324 | H | A | -1.5833 | |
| 325 | E | A | 0.0000 | |
| 326 | Q | A | -2.0503 | |
| 327 | H | A | -2.3417 | |
| 328 | I | A | 0.0000 | |
| 329 | S | A | 0.0000 | |
| 330 | E | A | -2.7705 | |
| 331 | S | A | -2.1208 | |
| 332 | I | A | 0.0000 | |
| 333 | N | A | -2.2543 | |
| 334 | N | A | -1.9931 | |
| 335 | I | A | 0.0000 | |
| 336 | V | A | -1.2618 | |
| 337 | D | A | -1.8528 | |
| 338 | H | A | -1.8258 | |
| 339 | A | A | 0.0000 | |
| 340 | I | A | -0.6666 | |
| 341 | K | A | -2.0998 | |
| 342 | S | A | -1.8697 | |
| 343 | K | A | -2.1740 | |
| 344 | D | A | 0.0000 | |
| 345 | H | A | -1.4675 | |
| 346 | A | A | -0.9461 | |
| 347 | T | A | 0.0000 | |
| 348 | F | A | -0.5686 | |
| 349 | N | A | -1.2275 | |
| 350 | F | A | -0.2518 | |
| 351 | L | A | 0.0000 | |
| 352 | Q | A | -0.5419 | |
| 353 | W | A | 0.0131 | |
| 354 | Y | A | 0.0000 | |
| 355 | V | A | -0.6142 | |
| 356 | A | A | -0.7562 | |
| 357 | E | A | -1.0332 | |
| 358 | Q | A | 0.0000 | |
| 359 | H | A | -1.5155 | |
| 360 | E | A | -1.9210 | |
| 361 | E | A | 0.0000 | |
| 362 | E | A | -1.0653 | |
| 363 | V | A | 0.1140 | |
| 364 | L | A | -0.3651 | |
| 365 | F | A | 0.0000 | |
| 366 | K | A | -1.9873 | |
| 367 | D | A | -2.0908 | |
| 368 | I | A | 0.0000 | |
| 369 | L | A | -1.8177 | |
| 370 | D | A | -2.8130 | |
| 371 | K | A | -1.4868 | |
| 372 | I | A | 0.0000 | |
| 373 | E | A | -2.0518 | |
| 374 | L | A | 0.0548 | |
| 375 | I | A | -0.0139 | |
| 376 | G | A | -1.5590 | |
| 377 | N | A | -2.2367 | |
| 378 | E | A | -3.0197 | |
| 379 | N | A | -2.5327 | |
| 380 | H | A | -1.3916 | |
| 381 | G | A | 0.0000 | |
| 382 | L | A | 0.1697 | |
| 383 | Y | A | 0.8675 | |
| 384 | L | A | 0.9606 | |
| 385 | A | A | 0.0000 | |
| 386 | D | A | -0.0684 | |
| 387 | Q | A | -0.6414 | |
| 388 | Y | A | 0.0742 | |
| 389 | V | A | 0.0000 | |
| 390 | K | A | -1.5475 | |
| 391 | G | A | -1.3968 | |
| 392 | I | A | -1.1812 | |
| 393 | A | A | 0.0000 | |
| 394 | K | A | -2.8698 | |
| 395 | S | A | -2.1179 | |
| 396 | R | A | -2.3515 | |
| 397 | K | A | -2.8505 | |
| 398 | S | A | -1.7593 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine