Project name: query_structure

Status: done

Started: 2026-03-16 23:22:11
Settings
Chain sequence(s) A: GIGDPVTCLKSGAICHPVFCPRRYKQIGTCGLPGTKCCKKP
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:26)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:27)
Show buried residues

Minimal score value
-3.5285
Maximal score value
2.2054
Average score
-0.3868
Total score value
-15.8595

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.3776
2 I A 0.0785
3 G A -0.4750
4 D A -0.2294
5 P A 0.6324
6 V A 1.4593
7 T A 0.3485
8 C A 0.0000
9 L A 1.1538
10 K A -0.6018
11 S A -0.3531
12 G A -0.6607
13 A A 0.0000
14 I A 0.2882
15 C A 0.6942
16 H A 0.5409
17 P A 0.9755
18 V A 2.2054
19 F A 1.9007
20 C A -0.3040
21 P A -1.1661
22 R A -2.8628
23 R A -3.5285
24 Y A -2.7283
25 K A -3.0131
26 Q A -1.7246
27 I A -0.6742
28 G A -0.7239
29 T A -0.6506
30 C A 0.0000
31 G A -0.1826
32 L A 0.7402
33 P A 0.2438
34 G A 0.2919
35 T A 0.3368
36 K A -0.2544
37 C A 0.0000
38 C A 0.0000
39 K A -2.1274
40 K A -3.2273
41 P A -1.8842
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Laboratory of Theory of Biopolymers 2018