| Chain sequence(s) |
L: MEDTVDFPDEAPEFPF
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:07)
[INFO] Main: Simulation completed successfully. (00:00:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 0 | M | L | 0.0588 | |
| 1 | E | L | -2.2693 | |
| 2 | D | L | -2.1881 | |
| 3 | T | L | 0.3012 | |
| 4 | V | L | 1.4484 | |
| 5 | D | L | -1.1251 | |
| 6 | F | L | 1.4481 | |
| 7 | P | L | 0.0489 | |
| 8 | D | L | -1.2237 | |
| 9 | E | L | -1.1361 | |
| 10 | A | L | -0.1687 | |
| 11 | P | L | -0.5703 | |
| 12 | E | L | -1.5183 | |
| 13 | F | L | 1.7711 | |
| 14 | P | L | 0.5052 | |
| 15 | F | L | 2.1279 |