Project name: L33P

Status: done

Started: 2026-06-20 01:41:50
Settings
Chain sequence(s) D: VHLTPEEKSAVTALWGKVNVDEVGGEALGRLPVVYPWTQRFFESFGDLSTPDAVMGNPKVKAHGKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFTPPVQAAYQKVVAGVANALAHKYH
input PDB
Selected Chain(s) D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with D chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:13)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:14)
Show buried residues

Minimal score value
-3.3834
Maximal score value
0.9553
Average score
-1.0519
Total score value
-153.578

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
2 V D 0.5907
3 H D -0.6934
4 L D 0.0000
5 T D -1.3217
6 P D -1.6788
7 E D -2.4241
8 E D -1.9541
9 K D -1.8267
10 S D -1.4120
11 A D -0.9917
12 V D 0.0000
13 T D -0.6291
14 A D -0.6210
15 L D 0.0000
16 W D -0.5649
17 G D -1.1768
18 K D -1.8574
19 V D 0.0000
20 N D -1.8236
21 V D -0.7090
22 D D -2.6376
23 E D -2.9044
24 V D 0.0000
25 G D 0.0000
26 G D 0.0000
27 E D -1.9309
28 A D 0.0000
29 L D 0.0000
30 G D 0.0000
31 R D -0.4903
32 L D 0.0000
33 P D 0.0000
34 V D 0.3729
35 V D 0.9553
36 Y D 0.7430
37 P D 0.0612
38 W D 0.1987
39 T D 0.0000
40 Q D -1.0726
41 R D -1.9231
42 F D -0.5329
43 F D -1.2751
44 E D -2.4713
45 S D -1.5113
46 F D -1.3476
47 G D -1.9646
48 D D -2.6898
49 L D 0.0000
50 S D -1.1069
51 T D -1.0572
52 P D -1.0491
53 D D -2.1157
54 A D -1.5928
55 V D 0.0000
56 M D -1.1648
57 G D -1.5284
58 N D 0.0000
59 P D -1.3217
60 K D -1.8310
61 V D 0.0000
62 K D -2.4002
63 A D -1.9815
64 H D -1.5674
65 G D 0.0000
66 K D -2.5276
67 K D -2.1630
68 V D -0.8118
69 L D 0.0000
70 G D -1.2045
71 A D -0.9463
72 F D 0.0000
73 S D -0.7762
74 D D -1.6438
75 G D 0.0000
76 L D -0.8664
77 A D -1.0022
78 H D -2.0169
79 L D -1.6153
80 D D -2.5575
81 N D -2.7655
82 L D 0.0000
83 K D -2.6150
84 G D -1.8765
85 T D -1.5004
86 F D 0.0000
87 A D -1.1232
88 T D -0.6485
89 L D -0.6163
90 S D 0.0000
91 E D -2.9772
92 L D -1.4829
93 H D -1.6333
94 C D 0.0000
95 D D -3.3834
96 K D -2.7182
97 L D -1.2928
98 H D -2.0842
99 V D -1.7784
100 D D -2.6104
101 P D -2.3275
102 E D -2.8852
103 N D 0.0000
104 F D 0.0000
105 R D -2.5683
106 L D -1.1160
107 L D -0.7737
108 G D 0.0000
109 N D -1.2162
110 V D 0.0000
111 L D 0.0000
112 V D 0.0000
113 C D -0.3562
114 V D 0.0000
115 L D 0.0000
116 A D -1.2859
117 H D -1.5704
118 H D -1.8976
119 F D -1.8613
120 G D -2.2475
121 K D -2.9275
122 E D -2.7871
123 F D -1.7228
124 T D -1.2807
125 P D -0.8945
126 P D -0.7165
127 V D -0.9595
128 Q D -0.9810
129 A D -0.6638
130 A D 0.0000
131 Y D 0.0000
132 Q D -1.1682
133 K D -0.7105
134 V D 0.0000
135 V D 0.0000
136 A D -0.7206
137 G D -0.4736
138 V D 0.0000
139 A D 0.0000
140 N D -1.5586
141 A D 0.0000
142 L D 0.0000
143 A D 0.0000
144 H D -2.3775
145 K D -2.6326
146 Y D -1.8790
147 H D -1.5498
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Laboratory of Theory of Biopolymers 2018