| Chain sequence(s) |
A: NKGCATCSIGIACLVDGPIPDFECAGATGLGLWG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:08)
[INFO] Main: Simulation completed successfully. (00:00:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | N | A | -2.1279 | |
| 2 | K | A | -2.3457 | |
| 3 | G | A | -1.1777 | |
| 4 | C | A | 0.2303 | |
| 5 | A | A | 0.3191 | |
| 6 | T | A | 0.8276 | |
| 7 | C | A | 1.3242 | |
| 8 | S | A | 1.1988 | |
| 9 | I | A | 1.6471 | |
| 10 | G | A | 1.7159 | |
| 11 | I | A | 3.0012 | |
| 12 | A | A | 2.0384 | |
| 13 | C | A | 1.7020 | |
| 14 | L | A | 2.7348 | |
| 15 | V | A | 2.0027 | |
| 16 | D | A | -0.2127 | |
| 17 | G | A | -0.1273 | |
| 18 | P | A | 0.4373 | |
| 19 | I | A | 1.5357 | |
| 20 | P | A | 0.6091 | |
| 21 | D | A | 0.1748 | |
| 22 | F | A | 1.1588 | |
| 23 | E | A | -0.6855 | |
| 24 | C | A | 0.2892 | |
| 25 | A | A | 0.2859 | |
| 26 | G | A | 0.3623 | |
| 27 | A | A | 0.6078 | |
| 28 | T | A | 0.7759 | |
| 29 | G | A | 0.8841 | |
| 30 | L | A | 1.7310 | |
| 31 | G | A | 1.1367 | |
| 32 | L | A | 2.0590 | |
| 33 | W | A | 1.8488 | |
| 34 | G | A | 0.6424 |