Project name: query_structure

Status: done

Started: 2026-03-17 00:17:04
Settings
Chain sequence(s) A: NKGCATCSIGIACLVDGPIPDFECAGATGLGLWG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:08)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:08)
Show buried residues

Minimal score value
-2.3457
Maximal score value
3.0012
Average score
0.7825
Total score value
26.6041

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 N A -2.1279
2 K A -2.3457
3 G A -1.1777
4 C A 0.2303
5 A A 0.3191
6 T A 0.8276
7 C A 1.3242
8 S A 1.1988
9 I A 1.6471
10 G A 1.7159
11 I A 3.0012
12 A A 2.0384
13 C A 1.7020
14 L A 2.7348
15 V A 2.0027
16 D A -0.2127
17 G A -0.1273
18 P A 0.4373
19 I A 1.5357
20 P A 0.6091
21 D A 0.1748
22 F A 1.1588
23 E A -0.6855
24 C A 0.2892
25 A A 0.2859
26 G A 0.3623
27 A A 0.6078
28 T A 0.7759
29 G A 0.8841
30 L A 1.7310
31 G A 1.1367
32 L A 2.0590
33 W A 1.8488
34 G A 0.6424
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Laboratory of Theory of Biopolymers 2018