| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVVDGKVLVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKLGDTENPTTPLHDTADVRVNFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPQGAPLPSGPPPSPLYTPPPPTSPYAVLPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPPVNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9425 | |
| 2 | L | A | 1.9639 | |
| 3 | P | A | 0.6564 | |
| 4 | P | A | 0.3738 | |
| 5 | T | A | 0.1281 | |
| 6 | T | A | 0.1325 | |
| 7 | P | A | 0.1717 | |
| 8 | V | A | 1.2367 | |
| 9 | A | A | 0.0844 | |
| 10 | K | A | -1.0254 | |
| 11 | V | A | -0.1657 | |
| 12 | Q | A | -1.3990 | |
| 13 | S | A | -1.5417 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3917 | |
| 16 | E | A | -2.4234 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4625 | |
| 20 | P | A | 0.1314 | |
| 21 | T | A | 0.1794 | |
| 22 | S | A | -0.0964 | |
| 23 | L | A | 0.1148 | |
| 24 | F | A | -0.0231 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2775 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8832 | |
| 31 | R | A | -2.6679 | |
| 32 | L | A | -0.7892 | |
| 33 | L | A | 1.1655 | |
| 34 | T | A | 1.3747 | |
| 35 | V | A | 1.8478 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2443 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6298 | |
| 40 | K | A | -1.6825 | |
| 41 | D | A | -0.7191 | |
| 42 | I | A | 1.2577 | |
| 43 | V | A | 2.1373 | |
| 44 | V | A | 1.4915 | |
| 45 | D | A | -1.0104 | |
| 46 | G | A | -0.5952 | |
| 47 | K | A | -0.2795 | |
| 48 | V | A | 1.9312 | |
| 49 | L | A | 2.4670 | |
| 50 | V | A | 1.4400 | |
| 51 | P | A | 0.3164 | |
| 52 | K | A | -0.6978 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1816 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4123 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2766 | |
| 70 | K | A | -1.7957 | |
| 71 | F | A | -0.6476 | |
| 72 | A | A | -0.5783 | |
| 73 | L | A | -0.8576 | |
| 74 | P | A | -1.2667 | |
| 75 | Q | A | -2.4999 | |
| 76 | K | A | -3.1050 | |
| 77 | D | A | -2.9880 | |
| 78 | F | A | -1.6511 | |
| 79 | Y | A | -1.8872 | |
| 80 | D | A | -2.6875 | |
| 81 | P | A | -2.3041 | |
| 82 | E | A | -3.0470 | |
| 83 | K | A | -3.3935 | |
| 84 | E | A | -2.4595 | |
| 85 | R | A | -1.2928 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6434 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9619 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3373 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6844 | |
| 99 | G | A | -0.5398 | |
| 100 | P | A | -0.4049 | |
| 101 | L | A | 0.0425 | |
| 102 | G | A | -0.1957 | |
| 103 | K | A | -0.6003 | |
| 104 | G | A | -0.4737 | |
| 105 | S | A | -0.5253 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.1286 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.1844 | |
| 110 | L | A | -0.0622 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1242 | |
| 113 | K | A | -0.5844 | |
| 114 | L | A | -0.9078 | |
| 115 | G | A | -0.8583 | |
| 116 | D | A | -1.1563 | |
| 117 | T | A | -0.8338 | |
| 118 | E | A | -1.7855 | |
| 119 | N | A | -1.9833 | |
| 120 | P | A | -1.3741 | |
| 121 | T | A | -0.7532 | |
| 122 | T | A | -0.5341 | |
| 123 | P | A | -0.1989 | |
| 124 | L | A | -0.6128 | |
| 125 | H | A | -1.2057 | |
| 126 | D | A | -2.1174 | |
| 127 | T | A | -1.3166 | |
| 128 | A | A | -1.2972 | |
| 129 | D | A | -1.9556 | |
| 130 | V | A | -1.2062 | |
| 131 | R | A | -0.9994 | |
| 132 | V | A | -0.2803 | |
| 133 | N | A | -0.9054 | |
| 134 | F | A | -0.3835 | |
| 135 | S | A | -0.3829 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.5232 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5637 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2094 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1220 | |
| 157 | D | A | 0.3034 | |
| 158 | I | A | 0.8369 | |
| 159 | A | A | 0.1117 | |
| 160 | E | A | -1.4805 | |
| 161 | P | A | -0.2287 | |
| 162 | C | A | 0.1856 | |
| 163 | P | A | -0.1713 | |
| 164 | G | A | -0.0797 | |
| 165 | L | A | 0.5881 | |
| 166 | P | A | -0.1152 | |
| 167 | P | A | -0.3397 | |
| 168 | G | A | -0.4508 | |
| 169 | A | A | 0.0927 | |
| 170 | C | A | 0.8753 | |
| 171 | P | A | 0.5561 | |
| 172 | P | A | 0.8475 | |
| 173 | I | A | 2.0444 | |
| 174 | Q | A | 0.8453 | |
| 175 | L | A | 1.4401 | |
| 176 | V | A | 0.8404 | |
| 177 | N | A | -0.3115 | |
| 178 | S | A | -0.0935 | |
| 179 | V | A | 0.4113 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3848 | |
| 182 | D | A | 0.0810 | |
| 183 | G | A | -0.1528 | |
| 184 | D | A | -0.5248 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1218 | |
| 190 | F | A | 0.0664 | |
| 191 | G | A | -0.1028 | |
| 192 | N | A | -0.2573 | |
| 193 | M | A | -0.1171 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3643 | |
| 197 | E | A | -2.5785 | |
| 198 | L | A | -1.1915 | |
| 199 | Q | A | -2.5326 | |
| 200 | Q | A | -3.3087 | |
| 201 | D | A | -3.5760 | |
| 202 | R | A | -3.3362 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2108 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3404 | |
| 211 | S | A | -1.8711 | |
| 212 | T | A | -1.4144 | |
| 213 | R | A | -2.0387 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1515 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3128 | |
| 220 | L | A | 0.5662 | |
| 221 | K | A | -1.1856 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8372 | |
| 224 | N | A | -1.5142 | |
| 225 | E | A | -1.2434 | |
| 226 | A | A | -0.5955 | |
| 227 | Y | A | -0.3576 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6688 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0683 | |
| 234 | F | A | 0.2536 | |
| 235 | G | A | -0.8283 | |
| 236 | R | A | -2.6203 | |
| 237 | R | A | -2.9039 | |
| 238 | E | A | -2.1540 | |
| 239 | Q | A | -0.2022 | |
| 240 | V | A | 1.3912 | |
| 241 | Y | A | 1.0751 | |
| 242 | A | A | 0.1747 | |
| 243 | R | A | -1.0129 | |
| 244 | H | A | -0.9727 | |
| 245 | F | A | 0.0466 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.7921 | |
| 249 | A | A | -1.3370 | |
| 250 | G | A | -1.1531 | |
| 251 | P | A | -0.9985 | |
| 252 | Q | A | -0.8948 | |
| 253 | G | A | -0.7253 | |
| 254 | A | A | -0.3861 | |
| 255 | P | A | -0.4360 | |
| 256 | L | A | 0.4355 | |
| 257 | P | A | 0.0101 | |
| 258 | S | A | -0.1957 | |
| 259 | G | A | -0.6169 | |
| 260 | P | A | -0.6498 | |
| 261 | P | A | -0.5093 | |
| 262 | P | A | -0.3642 | |
| 263 | S | A | 0.0392 | |
| 264 | P | A | 0.3835 | |
| 265 | L | A | 1.4796 | |
| 266 | Y | A | 0.8121 | |
| 267 | T | A | 0.0592 | |
| 268 | P | A | 0.1819 | |
| 269 | P | A | 0.2326 | |
| 270 | P | A | -0.3279 | |
| 271 | P | A | -0.0557 | |
| 272 | T | A | -0.1768 | |
| 273 | S | A | 0.2873 | |
| 274 | P | A | 0.4940 | |
| 275 | Y | A | 1.5173 | |
| 276 | A | A | 1.2691 | |
| 277 | V | A | 2.1522 | |
| 278 | L | A | 1.4835 | |
| 279 | P | A | 0.2446 | |
| 280 | P | A | -0.3974 | |
| 281 | T | A | -0.2806 | |
| 282 | D | A | -0.9552 | |
| 283 | Y | A | 0.7853 | |
| 284 | F | A | 0.6491 | |
| 285 | G | A | 0.2337 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9130 | |
| 291 | L | A | 1.6261 | |
| 292 | V | A | 0.6438 | |
| 293 | S | A | -0.1648 | |
| 294 | S | A | -0.9624 | |
| 295 | D | A | -1.8425 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1101 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6264 | |
| 301 | R | A | -1.8572 | |
| 302 | P | A | -0.9787 | |
| 303 | F | A | -0.1967 | |
| 304 | W | A | -0.5660 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0807 | |
| 307 | R | A | -2.8325 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2745 | |
| 310 | G | A | -1.2282 | |
| 311 | N | A | -1.2647 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8233 | |
| 319 | N | A | -0.8608 | |
| 320 | E | A | -1.0472 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3370 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0809 | |
| 333 | N | A | 0.5485 | |
| 334 | F | A | 1.7649 | |
| 335 | T | A | 0.8668 | |
| 336 | I | A | 0.4273 | |
| 337 | S | A | -0.8350 | |
| 338 | Q | A | -1.4862 | |
| 339 | Q | A | -0.8500 | |
| 340 | L | A | 0.8333 | |
| 341 | C | A | 0.4677 | |
| 342 | T | A | 0.1750 | |
| 343 | P | A | -0.2572 | |
| 344 | P | A | 0.1029 | |
| 345 | V | A | 0.6821 | |
| 346 | N | A | -0.0572 | |
| 347 | V | A | 1.7141 | |
| 348 | Y | A | 1.5572 | |
| 349 | D | A | 0.0958 | |
| 350 | P | A | -0.3394 | |
| 351 | S | A | -0.2740 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.5279 | |
| 354 | K | A | -1.6677 | |
| 355 | N | A | -1.7152 | |
| 356 | Y | A | -0.1058 | |
| 357 | L | A | 0.6514 | |
| 358 | R | A | 1.0049 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4022 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0674 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9992 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6778 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3037 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3158 | |
| 376 | L | A | -1.7135 | |
| 377 | D | A | -1.9968 | |
| 378 | P | A | -1.0407 | |
| 379 | G | A | -1.0136 | |
| 380 | V | A | -0.9322 | |
| 381 | L | A | -0.5318 | |
| 382 | A | A | -0.6511 | |
| 383 | H | A | -0.8030 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3906 | |
| 386 | T | A | -0.5404 | |
| 387 | M | A | -0.2878 | |
| 388 | N | A | -0.8507 | |
| 389 | P | A | -1.2360 | |
| 390 | T | A | -1.4368 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4343 | |
| 393 | E | A | -2.7745 | |
| 394 | N | A | -2.5504 | |
| 395 | W | A | -1.3697 | |
| 396 | N | A | -1.1012 | |
| 397 | L | A | -0.1837 | |
| 398 | G | A | 0.5293 | |
| 399 | F | A | 2.4164 | |
| 400 | V | A | 1.8276 | |
| 401 | P | A | 0.0462 | |
| 402 | P | A | -1.8497 | |
| 403 | K | A | -3.3135 | |
| 404 | E | A | -3.8408 | |
| 405 | R | A | -3.8745 | |
| 406 | E | A | -3.7674 | |
| 407 | D | A | -2.8688 | |
| 408 | P | A | -1.7576 | |
| 409 | Y | A | -0.9848 | |
| 410 | K | A | -2.1096 | |
| 411 | G | A | -0.6407 | |
| 412 | L | A | 0.6723 | |
| 413 | I | A | 1.5834 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4038 | |
| 416 | E | A | -1.7201 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9588 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0467 | |
| 421 | E | A | -2.7608 | |
| 422 | R | A | -2.5886 | |
| 423 | F | A | -1.2558 | |
| 424 | S | A | -1.4566 | |
| 425 | Q | A | -1.8750 | |
| 426 | D | A | -2.8985 | |
| 427 | L | A | -1.9842 | |
| 428 | D | A | -2.7766 | |
| 429 | Q | A | -2.6178 | |
| 430 | F | A | -1.4252 | |
| 431 | A | A | -0.8971 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5732 | |
| 435 | K | A | -0.7106 | |
| 436 | F | A | 0.1471 | |
| 437 | L | A | 1.0317 | |
| 438 | Y | A | 0.8274 | |
| 439 | Q | A | -0.2774 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine