| Chain sequence(s) |
A: FQFGHGFQF
C: FQFGHGFQF B: FQFGHGFQF E: FQFGHGFQF D: FQFGHGFQF G: FQFGHGFQF F: FQFGHGFQF H: FQFGHGFQF input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:45)
[INFO] Main: Simulation completed successfully. (00:00:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 2.9659 | |
| 2 | Q | A | 2.0330 | |
| 3 | F | A | 2.3813 | |
| 4 | G | A | 0.3704 | |
| 5 | H | A | -0.8267 | |
| 6 | G | A | 0.1094 | |
| 7 | F | A | 1.9717 | |
| 8 | Q | A | 2.0427 | |
| 9 | F | A | 2.7680 | |
| 1 | F | B | 3.5448 | |
| 2 | Q | B | 0.0000 | |
| 3 | F | B | 2.2337 | |
| 4 | G | B | 0.3380 | |
| 5 | H | B | -0.7156 | |
| 6 | G | B | -0.1327 | |
| 7 | F | B | 1.5962 | |
| 8 | Q | B | 2.4486 | |
| 9 | F | B | 3.1670 | |
| 1 | F | C | 3.0647 | |
| 2 | Q | C | 0.0000 | |
| 3 | F | C | 2.2995 | |
| 4 | G | C | 0.3074 | |
| 5 | H | C | -0.7435 | |
| 6 | G | C | 0.0000 | |
| 7 | F | C | 1.5368 | |
| 8 | Q | C | 2.3499 | |
| 9 | F | C | 2.9411 | |
| 1 | F | D | 3.6781 | |
| 2 | Q | D | 0.0000 | |
| 3 | F | D | 2.6513 | |
| 4 | G | D | 0.6578 | |
| 5 | H | D | -0.5228 | |
| 6 | G | D | 0.0000 | |
| 7 | F | D | 1.4351 | |
| 8 | Q | D | 2.4484 | |
| 9 | F | D | 2.9596 | |
| 1 | F | E | 3.4446 | |
| 2 | Q | E | 0.0000 | |
| 3 | F | E | 2.4557 | |
| 4 | G | E | 0.4464 | |
| 5 | H | E | -0.5675 | |
| 6 | G | E | 0.0000 | |
| 7 | F | E | 1.4118 | |
| 8 | Q | E | 2.3987 | |
| 9 | F | E | 2.8702 | |
| 1 | F | F | 3.0679 | |
| 2 | Q | F | 0.0000 | |
| 3 | F | F | 2.2186 | |
| 4 | G | F | 0.1639 | |
| 5 | H | F | -0.8629 | |
| 6 | G | F | -0.3379 | |
| 7 | F | F | 1.4463 | |
| 8 | Q | F | 2.2664 | |
| 9 | F | F | 2.8716 | |
| 1 | F | G | 3.1775 | |
| 2 | Q | G | 0.0000 | |
| 3 | F | G | 2.3660 | |
| 4 | G | G | 0.2816 | |
| 5 | H | G | -0.7712 | |
| 6 | G | G | 0.0377 | |
| 7 | F | G | 1.6667 | |
| 8 | Q | G | 2.5799 | |
| 9 | F | G | 3.0317 | |
| 1 | F | H | 3.0188 | |
| 2 | Q | H | 2.2919 | |
| 3 | F | H | 2.5117 | |
| 4 | G | H | 0.6127 | |
| 5 | H | H | -0.6299 | |
| 6 | G | H | 0.2838 | |
| 7 | F | H | 2.2222 | |
| 8 | Q | H | 2.2447 | |
| 9 | F | H | 2.9353 |