Project name: 62b73499167eb15

Status: done

Started: 2026-03-21 09:11:18
Settings
Chain sequence(s) A: QVQLVESGGGLVQAGGSLRLSCAASGSTFSRYALAWYRQTPGKQREWVATITSGGVTSYVDSVKGRFTVSRDNAANTVYLQMISLKPEDTAVYYCKAPEILSPWGQGTQVTVSSGGGGSGGGGSGGGGSQVQLVESGGGLVQPGGSLRLSCAASGFTRDAYAIGWFRQAPGKEREGVSCISASGSRTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAIYYCAATEFGTGYVCYGGLEGNEFSFWGQGTQVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:52)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:54)
Show buried residues

Minimal score value
-3.706
Maximal score value
1.602
Average score
-0.7729
Total score value
-199.4059

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -1.1710
2 V A -0.2171
3 Q A -0.6199
4 L A 0.0000
5 V A 0.0638
6 E A 0.0000
7 S A -0.5958
8 G A -0.9510
9 G A -0.6537
10 G A -0.3584
11 L A -0.0279
12 V A -0.5236
13 Q A -1.6096
14 A A -1.5303
15 G A -1.0090
16 G A -0.5765
17 S A -0.5504
18 L A -0.7451
19 R A -1.9251
20 L A 0.0000
21 S A -0.5358
22 C A 0.0000
23 A A -0.1604
24 A A -0.2725
25 S A -0.5439
26 G A -0.6835
27 S A -0.8010
28 T A -0.7815
29 F A 0.0000
30 S A -1.5875
31 R A -2.2319
32 Y A -1.1710
33 A A -0.6437
34 L A 0.0000
35 A A 0.0000
36 W A 0.0000
37 Y A -0.3825
38 R A -1.0539
39 Q A -1.6814
40 T A -1.7953
41 P A -1.3011
42 G A -1.7960
43 K A -3.0073
44 Q A -2.8019
45 R A -2.1861
46 E A -1.8588
47 W A -0.4347
48 V A 0.0000
49 A A 0.0000
50 T A 0.2497
51 I A 0.0000
52 T A -0.0436
53 S A -0.9113
54 G A -0.5208
55 G A 0.0806
56 V A 1.3736
57 T A 0.5736
58 S A -0.1127
59 Y A -0.7995
60 V A -1.1330
61 D A -2.3377
62 S A -1.6838
63 V A 0.0000
64 K A -2.5622
65 G A -1.5351
66 R A -0.9190
67 F A 0.0000
68 T A -0.7195
69 V A 0.0000
70 S A -0.4153
71 R A -1.1061
72 D A -1.5354
73 N A -1.8345
74 A A -0.7973
75 A A -0.7286
76 N A -1.2923
77 T A -0.7184
78 V A 0.0000
79 Y A -0.6338
80 L A 0.0000
81 Q A -1.0552
82 M A 0.0000
83 I A 0.0968
84 S A -0.3532
85 L A 0.0000
86 K A -1.8377
87 P A -1.7695
88 E A -2.2241
89 D A 0.0000
90 T A -0.8685
91 A A 0.0000
92 V A -0.1536
93 Y A 0.0000
94 Y A -0.1606
95 C A 0.0000
96 K A -0.0547
97 A A 0.0000
98 P A -0.6565
99 E A -1.5663
100 I A 0.1592
101 L A 1.2890
102 S A 0.0000
103 P A 0.1621
104 W A 0.3490
105 G A 0.0000
106 Q A -0.7526
107 G A 0.0000
108 T A 0.0000
109 Q A -0.5659
110 V A 0.0000
111 T A -0.5782
112 V A 0.0000
113 S A -1.1094
114 S A -1.3791
115 G A -1.3642
116 G A -1.2543
117 G A -1.1833
118 G A -1.1770
119 S A -1.0422
120 G A -1.1285
121 G A -1.1510
122 G A -1.1522
123 G A -1.1417
124 S A -0.9319
125 G A -1.1298
126 G A -1.1534
127 G A -1.2612
128 G A -1.2280
129 S A -1.1939
130 Q A -1.4688
131 V A -0.4477
132 Q A -0.5797
133 L A 0.0000
134 V A -0.0495
135 E A 0.0000
136 S A -0.5321
137 G A -1.0074
138 G A -0.5522
139 G A -0.2706
140 L A 0.1605
141 V A -0.3657
142 Q A -1.3365
143 P A -1.5540
144 G A -1.3293
145 G A -0.9469
146 S A -1.1277
147 L A -0.9997
148 R A -2.0840
149 L A 0.0000
150 S A -0.5718
151 C A 0.0000
152 A A -0.4506
153 A A 0.0000
154 S A -0.9190
155 G A -0.8876
156 F A -1.1485
157 T A -1.4100
158 R A -2.9912
159 D A -2.7241
160 A A -1.3220
161 Y A 0.0000
162 A A 0.0000
163 I A 0.0000
164 G A 0.0000
165 W A 0.0000
166 F A 0.0000
167 R A 0.0000
168 Q A -1.9730
169 A A -1.9072
170 P A -1.3975
171 G A -1.9701
172 K A -3.3928
173 E A -3.7060
174 R A -3.3092
175 E A -2.7445
176 G A -1.6929
177 V A 0.0000
178 S A 0.0000
179 C A 0.0000
180 I A 0.0000
181 S A -0.7083
182 A A -1.2363
183 S A -1.0219
184 G A -1.4316
185 S A -1.3364
186 R A -1.9242
187 T A -0.9248
188 N A -0.8276
189 Y A -1.0529
190 A A -1.5805
191 D A -2.5241
192 S A -1.8492
193 V A 0.0000
194 K A -2.6801
195 G A -1.7766
196 R A -1.4743
197 F A 0.0000
198 T A -0.9007
199 I A 0.0000
200 S A -0.7160
201 R A -1.0422
202 D A -1.5085
203 N A -2.1836
204 A A -1.7122
205 K A -2.3567
206 N A -2.0682
207 T A -1.0418
208 V A 0.0000
209 Y A -0.6606
210 L A 0.0000
211 Q A -1.2850
212 M A 0.0000
213 N A -1.3915
214 S A -1.1958
215 L A 0.0000
216 K A -2.2451
217 P A -1.8581
218 E A -2.3226
219 D A 0.0000
220 T A -0.8319
221 A A 0.0000
222 I A -0.1062
223 Y A 0.0000
224 Y A -0.3106
225 C A 0.0000
226 A A 0.0000
227 A A 0.0000
228 T A 0.0000
229 E A -1.2060
230 F A 0.7210
231 G A -0.0552
232 T A -0.0285
233 G A 0.5051
234 Y A 1.6020
235 V A 0.0000
236 C A 0.1259
237 Y A 1.1401
238 G A 0.1195
239 G A -0.5703
240 L A -1.2638
241 E A -2.7947
242 G A -2.1606
243 N A -2.1951
244 E A -1.7595
245 F A 0.0000
246 S A -0.4254
247 F A 0.4688
248 W A 0.3714
249 G A -0.2517
250 Q A -1.0687
251 G A 0.0000
252 T A 0.0000
253 Q A -0.2858
254 V A 0.0000
255 T A -0.4933
256 V A 0.0000
257 S A -0.8876
258 S A -0.6218
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Laboratory of Theory of Biopolymers 2018