Project name: 62bc505b647e553

Status: done

Started: 2026-05-21 15:26:44
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Chain sequence(s) A: SGHKGHK
C: SGHKGHK
B: SGHKGHK
E: SGHKGHK
D: SGHKGHK
G: SGHKGHK
F: SGHKGHK
I: SGHKGHK
H: SGHKGHK
K: SGHKGHK
J: SGHKGHK
L: SGHKGHK
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:48)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:51)
Show buried residues

Minimal score value
-3.5567
Maximal score value
0.0
Average score
-1.719
Total score value
-144.3993

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 S A -0.7393
2 G A -1.0102
3 H A 0.0000
4 K A -1.5907
5 G A 0.0000
6 H A -2.5566
7 K A -3.5468
1 S B -0.9947
2 G B -1.5395
3 H B 0.0000
4 K B -2.0792
5 G B 0.0000
6 H B -2.8778
7 K B -3.5567
1 S C -0.8889
2 G C -1.7422
3 H C -2.3199
4 K C -2.6835
5 G C 0.0000
6 H C -2.8132
7 K C -3.0995
1 S D -1.0130
2 G D -1.7015
3 H D 0.0000
4 K D -2.4435
5 G D 0.0000
6 H D -2.7024
7 K D -2.8226
1 S E -1.0644
2 G E -1.6352
3 H E -2.0997
4 K E -2.0476
5 G E 0.0000
6 H E -2.2437
7 K E -2.3441
1 S F -1.0784
2 G F -1.4314
3 H F -1.7200
4 K F -1.6460
5 G F 0.0000
6 H F -1.8721
7 K F -2.2937
1 S G -1.0900
2 G G -1.7506
3 H G -2.0942
4 K G -1.8274
5 G G 0.0000
6 H G -2.5056
7 K G -3.1384
1 S H -1.0256
2 G H -1.6818
3 H H -2.2468
4 K H -2.0906
5 G H -2.4155
6 H H -2.4872
7 K H -2.9297
1 S I -0.8234
2 G I -1.5820
3 H I -2.3135
4 K I -2.6386
5 G I -2.5444
6 H I -2.3869
7 K I -2.8443
1 S J -1.0407
2 G J -1.7752
3 H J -2.2820
4 K J -2.5306
5 G J 0.0000
6 H J -2.7852
7 K J -3.2808
1 S K -0.8564
2 G K -1.5723
3 H K -1.9701
4 K K -1.9890
5 G K 0.0000
6 H K -2.5191
7 K K -3.5343
1 S L -0.8545
2 G L -1.2611
3 H L 0.0000
4 K L -1.6373
5 G L 0.0000
6 H L -2.4866
7 K L -3.4096
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Laboratory of Theory of Biopolymers 2018