| Chain sequence(s) |
A: SGHKGHK
C: SGHKGHK B: SGHKGHK E: SGHKGHK D: SGHKGHK G: SGHKGHK F: SGHKGHK I: SGHKGHK H: SGHKGHK K: SGHKGHK J: SGHKGHK L: SGHKGHK input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:48)
[INFO] Main: Simulation completed successfully. (00:03:51)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -0.7393 | |
| 2 | G | A | -1.0102 | |
| 3 | H | A | 0.0000 | |
| 4 | K | A | -1.5907 | |
| 5 | G | A | 0.0000 | |
| 6 | H | A | -2.5566 | |
| 7 | K | A | -3.5468 | |
| 1 | S | B | -0.9947 | |
| 2 | G | B | -1.5395 | |
| 3 | H | B | 0.0000 | |
| 4 | K | B | -2.0792 | |
| 5 | G | B | 0.0000 | |
| 6 | H | B | -2.8778 | |
| 7 | K | B | -3.5567 | |
| 1 | S | C | -0.8889 | |
| 2 | G | C | -1.7422 | |
| 3 | H | C | -2.3199 | |
| 4 | K | C | -2.6835 | |
| 5 | G | C | 0.0000 | |
| 6 | H | C | -2.8132 | |
| 7 | K | C | -3.0995 | |
| 1 | S | D | -1.0130 | |
| 2 | G | D | -1.7015 | |
| 3 | H | D | 0.0000 | |
| 4 | K | D | -2.4435 | |
| 5 | G | D | 0.0000 | |
| 6 | H | D | -2.7024 | |
| 7 | K | D | -2.8226 | |
| 1 | S | E | -1.0644 | |
| 2 | G | E | -1.6352 | |
| 3 | H | E | -2.0997 | |
| 4 | K | E | -2.0476 | |
| 5 | G | E | 0.0000 | |
| 6 | H | E | -2.2437 | |
| 7 | K | E | -2.3441 | |
| 1 | S | F | -1.0784 | |
| 2 | G | F | -1.4314 | |
| 3 | H | F | -1.7200 | |
| 4 | K | F | -1.6460 | |
| 5 | G | F | 0.0000 | |
| 6 | H | F | -1.8721 | |
| 7 | K | F | -2.2937 | |
| 1 | S | G | -1.0900 | |
| 2 | G | G | -1.7506 | |
| 3 | H | G | -2.0942 | |
| 4 | K | G | -1.8274 | |
| 5 | G | G | 0.0000 | |
| 6 | H | G | -2.5056 | |
| 7 | K | G | -3.1384 | |
| 1 | S | H | -1.0256 | |
| 2 | G | H | -1.6818 | |
| 3 | H | H | -2.2468 | |
| 4 | K | H | -2.0906 | |
| 5 | G | H | -2.4155 | |
| 6 | H | H | -2.4872 | |
| 7 | K | H | -2.9297 | |
| 1 | S | I | -0.8234 | |
| 2 | G | I | -1.5820 | |
| 3 | H | I | -2.3135 | |
| 4 | K | I | -2.6386 | |
| 5 | G | I | -2.5444 | |
| 6 | H | I | -2.3869 | |
| 7 | K | I | -2.8443 | |
| 1 | S | J | -1.0407 | |
| 2 | G | J | -1.7752 | |
| 3 | H | J | -2.2820 | |
| 4 | K | J | -2.5306 | |
| 5 | G | J | 0.0000 | |
| 6 | H | J | -2.7852 | |
| 7 | K | J | -3.2808 | |
| 1 | S | K | -0.8564 | |
| 2 | G | K | -1.5723 | |
| 3 | H | K | -1.9701 | |
| 4 | K | K | -1.9890 | |
| 5 | G | K | 0.0000 | |
| 6 | H | K | -2.5191 | |
| 7 | K | K | -3.5343 | |
| 1 | S | L | -0.8545 | |
| 2 | G | L | -1.2611 | |
| 3 | H | L | 0.0000 | |
| 4 | K | L | -1.6373 | |
| 5 | G | L | 0.0000 | |
| 6 | H | L | -2.4866 | |
| 7 | K | L | -3.4096 |