| Chain sequence(s) |
D: EVQLVESGGGLVQPGGSLRLSCAASGSVPFSSFSSMGWFRQAPGKGRELVAYITSSSTYYADSVKGRFTISRDNAKRMVYLQMNSLRAEDTAVYYCAAGYAAVFDYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with D chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:39)
[INFO] Main: Simulation completed successfully. (00:00:40)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | D | -2.0495 | |
| 2 | V | D | -1.4029 | |
| 3 | Q | D | -1.2424 | |
| 4 | L | D | 0.0000 | |
| 5 | V | D | 0.6377 | |
| 6 | E | D | -0.1800 | |
| 7 | S | D | -0.5777 | |
| 8 | G | D | -1.0523 | |
| 9 | G | D | -0.7984 | |
| 10 | G | D | -0.0352 | |
| 11 | L | D | 0.9935 | |
| 12 | V | D | -0.0917 | |
| 13 | Q | D | -1.4434 | |
| 14 | P | D | -1.8989 | |
| 15 | G | D | -1.6762 | |
| 16 | G | D | -1.2172 | |
| 17 | S | D | -1.5676 | |
| 18 | L | D | -1.0162 | |
| 19 | R | D | -2.1465 | |
| 20 | L | D | 0.0000 | |
| 21 | S | D | -0.4345 | |
| 22 | C | D | 0.0000 | |
| 23 | A | D | -0.4793 | |
| 24 | A | D | 0.0000 | |
| 25 | S | D | -0.9543 | |
| 26 | G | D | -1.3033 | |
| 27 | S | D | -0.9205 | |
| 28 | V | D | -0.4182 | |
| 29 | P | D | -0.6135 | |
| 30 | F | D | 0.0000 | |
| 31 | S | D | -1.0175 | |
| 32 | S | D | -0.2412 | |
| 33 | F | D | 0.0000 | |
| 34 | S | D | 0.2324 | |
| 35 | S | D | 0.0000 | |
| 36 | M | D | 0.0000 | |
| 37 | G | D | 0.0000 | |
| 38 | W | D | 0.0000 | |
| 39 | F | D | -0.2074 | |
| 40 | R | D | 0.0000 | |
| 41 | Q | D | -1.9391 | |
| 42 | A | D | -1.8749 | |
| 43 | P | D | -1.2592 | |
| 44 | G | D | -1.7261 | |
| 45 | K | D | -2.8533 | |
| 46 | G | D | -2.5634 | |
| 47 | R | D | -2.6895 | |
| 48 | E | D | -2.0198 | |
| 49 | L | D | -0.1552 | |
| 50 | V | D | 0.0000 | |
| 51 | A | D | 0.0000 | |
| 52 | Y | D | 0.6273 | |
| 53 | I | D | 0.2835 | |
| 54 | T | D | 0.0451 | |
| 55 | S | D | -0.4139 | |
| 56 | S | D | -0.3426 | |
| 57 | S | D | -0.0073 | |
| 58 | T | D | 0.3671 | |
| 59 | Y | D | 0.5223 | |
| 60 | Y | D | -0.4158 | |
| 61 | A | D | -1.1381 | |
| 62 | D | D | -2.4076 | |
| 63 | S | D | -1.7748 | |
| 64 | V | D | 0.0000 | |
| 65 | K | D | -2.5192 | |
| 66 | G | D | -1.8682 | |
| 67 | R | D | -1.8194 | |
| 68 | F | D | 0.0000 | |
| 69 | T | D | -0.8720 | |
| 70 | I | D | 0.0000 | |
| 71 | S | D | -0.4037 | |
| 72 | R | D | -1.2657 | |
| 73 | D | D | -2.0433 | |
| 74 | N | D | -2.6738 | |
| 75 | A | D | -2.0043 | |
| 76 | K | D | -2.9159 | |
| 77 | R | D | -2.9812 | |
| 78 | M | D | -1.5306 | |
| 79 | V | D | 0.0000 | |
| 80 | Y | D | -0.5455 | |
| 81 | L | D | 0.0000 | |
| 82 | Q | D | -1.5121 | |
| 83 | M | D | 0.0000 | |
| 84 | N | D | -2.2170 | |
| 85 | S | D | -1.6746 | |
| 86 | L | D | 0.0000 | |
| 87 | R | D | -2.9157 | |
| 88 | A | D | -1.9755 | |
| 89 | E | D | -2.4274 | |
| 90 | D | D | 0.0000 | |
| 91 | T | D | -0.9671 | |
| 92 | A | D | 0.0000 | |
| 93 | V | D | -0.6050 | |
| 94 | Y | D | 0.0000 | |
| 95 | Y | D | -0.3154 | |
| 96 | C | D | 0.0000 | |
| 97 | A | D | 0.0000 | |
| 98 | A | D | 0.0000 | |
| 99 | G | D | 0.0000 | |
| 100 | Y | D | 1.1195 | |
| 101 | A | D | 1.0055 | |
| 102 | A | D | 1.0455 | |
| 103 | V | D | 1.7283 | |
| 104 | F | D | 0.5975 | |
| 105 | D | D | -0.8262 | |
| 106 | Y | D | -0.3778 | |
| 107 | W | D | -0.0774 | |
| 108 | G | D | -0.2210 | |
| 109 | Q | D | -0.9791 | |
| 110 | G | D | -0.6132 | |
| 111 | T | D | -0.8140 | |
| 112 | Q | D | -1.0523 | |
| 113 | V | D | 0.0000 | |
| 114 | T | D | -0.3798 | |
| 115 | V | D | 0.0000 | |
| 116 | S | D | -0.8460 | |
| 117 | S | D | -0.7438 |