Project name: RFC20

Status: done

Started: 2025-07-15 15:43:08
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Chain sequence(s) A: NTFTSTTTFEASTGTGEEIYAVIYKVTITSPEKTELVNISVVSSDLELAEKRAEEELAKVLAEALEAGADVKVEKTLASTGKDGKTKTEKVELSDEEIKKLAEEYRERKAKELA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
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Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:42)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:43)
Show buried residues

Minimal score value
-4.4773
Maximal score value
1.1341
Average score
-1.7561
Total score value
-200.1922

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 N A -1.2615
2 T A 0.0526
3 F A 1.1341
4 T A 0.5971
5 S A 0.1861
6 T A -0.1558
7 T A -0.3070
8 T A -0.4397
9 F A -0.6238
10 E A -2.1417
11 A A -1.3962
12 S A -1.9259
13 T A -1.5029
14 G A -1.1131
15 T A -1.3299
16 G A -2.5851
17 E A -2.9135
18 E A -2.7505
19 I A -1.1497
20 Y A -0.4950
21 A A 0.0000
22 V A 0.0000
23 I A 0.0000
24 Y A 0.0000
25 K A -1.5382
26 V A 0.0000
27 T A -1.1094
28 I A 0.0000
29 T A -2.0766
30 S A -2.0105
31 P A -1.8648
32 E A -2.7715
33 K A -3.0774
34 T A -1.9526
35 E A -1.2581
36 L A -0.0901
37 V A -0.2266
38 N A -1.1169
39 I A 0.0000
40 S A -0.4684
41 V A 0.0000
42 V A 1.0678
43 S A -0.2460
44 S A -1.1647
45 D A -1.7450
46 L A -1.2432
47 E A -2.5631
48 L A -1.5050
49 A A 0.0000
50 E A -2.6850
51 K A -3.6015
52 R A -3.3591
53 A A 0.0000
54 E A -3.0058
55 E A -3.5786
56 E A -2.9400
57 L A 0.0000
58 A A 0.0000
59 K A -2.3601
60 V A -1.2785
61 L A 0.0000
62 A A 0.0000
63 E A -2.6277
64 A A 0.0000
65 L A -1.9807
66 E A -2.4278
67 A A -1.6993
68 G A -1.5939
69 A A -2.2976
70 D A -2.3570
71 V A -2.0250
72 K A -2.7603
73 V A 0.0000
74 E A -2.4761
75 K A -1.8004
76 T A -1.7114
77 L A -1.1065
78 A A 0.0000
79 S A 0.0000
80 T A 0.0000
81 G A -3.1068
82 K A -3.8637
83 D A -3.7341
84 G A -3.5249
85 K A -3.5085
86 T A -2.6851
87 K A -2.7231
88 T A -2.2005
89 E A -2.8646
90 K A -2.8640
91 V A -1.7247
92 E A -2.7903
93 L A -2.4108
94 S A -2.8636
95 D A -4.1526
96 E A -4.0418
97 E A -3.8005
98 I A 0.0000
99 K A -4.0756
100 K A -4.3969
101 L A -3.2851
102 A A 0.0000
103 E A -4.3732
104 E A -4.2889
105 Y A -3.7508
106 R A -4.0265
107 E A -4.4773
108 R A -4.3891
109 K A -3.5321
110 A A -2.5807
111 K A -3.3849
112 E A -2.8777
113 L A -0.4700
114 A A -0.6698
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Laboratory of Theory of Biopolymers 2018