Chain sequence(s) |
H: SVKESGGRLVTPGTPLTLTCTVSGFSLSGFAMGWVRQAPGKGLEYIGLISAYDDTFYASWAKGRFTISKTSTTVDLKIVSPTTEDTATYFCARYGPYGGNSYDTWGPGTLVTVSS
L: AAVLTQTPASVSAAVGDTVTINCQSSPSVTSNYLSWFQQKPGQPPKLLIYDASDLASGVPSRFSGSGSGTQFTLTISGVQSDDAATYYCLGEYDSTTDAFGGGTNVEIK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:26) [INFO] Main: Simulation completed successfully. (00:01:27) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
3 | S | H | -0.6971 | |
4 | V | H | 0.0000 | |
5 | K | H | -1.4857 | |
6 | E | H | 0.0000 | |
7 | S | H | -0.6698 | |
8 | G | H | -0.5359 | |
9 | G | H | -0.1903 | |
11 | R | H | -0.4219 | |
12 | L | H | 0.6068 | |
13 | V | H | 0.0000 | |
14 | T | H | -0.3022 | |
15 | P | H | -0.6749 | |
16 | G | H | -0.5786 | |
17 | T | H | -0.3367 | |
18 | P | H | -0.2884 | |
19 | L | H | 0.0000 | |
20 | T | H | -0.4724 | |
21 | L | H | 0.0000 | |
22 | T | H | -0.6632 | |
23 | C | H | 0.0000 | |
24 | T | H | -0.5961 | |
25 | V | H | -0.4557 | |
26 | S | H | -0.5916 | |
27 | G | H | -0.4881 | |
28 | F | H | -0.1283 | |
29 | S | H | -0.2783 | |
30 | L | H | 0.0000 | |
35 | S | H | -0.3370 | |
36 | G | H | -0.0973 | |
37 | F | H | 0.4302 | |
38 | A | H | 0.0000 | |
39 | M | H | 0.0000 | |
40 | G | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | V | H | 0.0000 | |
43 | R | H | 0.0000 | |
44 | Q | H | -0.8314 | |
45 | A | H | -1.1210 | |
46 | P | H | -0.9098 | |
47 | G | H | -1.4865 | |
48 | K | H | -2.2798 | |
49 | G | H | -1.4396 | |
50 | L | H | 0.0000 | |
51 | E | H | -0.9150 | |
52 | Y | H | 0.0000 | |
53 | I | H | 0.0000 | |
54 | G | H | 0.0000 | |
55 | L | H | 0.0000 | |
56 | I | H | 0.0000 | |
57 | S | H | 0.0000 | |
58 | A | H | -0.2671 | |
59 | Y | H | -0.0940 | |
63 | D | H | -2.0913 | |
64 | D | H | -2.1909 | |
65 | T | H | -0.9894 | |
66 | F | H | -0.4350 | |
67 | Y | H | -0.2583 | |
68 | A | H | -0.3306 | |
69 | S | H | -0.5052 | |
70 | W | H | -0.3905 | |
71 | A | H | 0.0000 | |
72 | K | H | -1.9140 | |
74 | G | H | -1.3071 | |
75 | R | H | -0.9229 | |
76 | F | H | 0.0000 | |
77 | T | H | -0.6332 | |
78 | I | H | 0.0000 | |
79 | S | H | -1.0576 | |
80 | K | H | -0.9226 | |
81 | T | H | -0.4574 | |
84 | S | H | -0.4131 | |
85 | T | H | -0.2908 | |
86 | T | H | -0.4752 | |
87 | V | H | 0.0000 | |
88 | D | H | -0.7163 | |
89 | L | H | 0.0000 | |
90 | K | H | -0.7011 | |
91 | I | H | 0.0000 | |
92 | V | H | 0.1997 | |
93 | S | H | -0.2495 | |
94 | P | H | 0.0000 | |
95 | T | H | -0.8269 | |
96 | T | H | -1.1046 | |
97 | E | H | -1.8867 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.4075 | |
100 | A | H | 0.0000 | |
101 | T | H | 0.4670 | |
102 | Y | H | 0.0000 | |
103 | F | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | R | H | -0.2450 | |
107 | Y | H | 0.0896 | |
108 | G | H | 0.0000 | |
109 | P | H | 0.4586 | |
110 | Y | H | 1.0663 | |
111 | G | H | 0.0000 | |
112 | G | H | 0.0000 | |
113 | N | H | 0.0000 | |
114 | S | H | 0.0000 | |
115 | Y | H | 0.0000 | |
116 | D | H | -1.0014 | |
117 | T | H | -0.7332 | |
118 | W | H | -0.7902 | |
119 | G | H | 0.0000 | |
120 | P | H | -0.7767 | |
121 | G | H | -0.3871 | |
122 | T | H | 0.0923 | |
123 | L | H | 1.1930 | |
124 | V | H | 0.0000 | |
125 | T | H | 0.1384 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.0772 | |
128 | S | H | -0.1629 | |
1 | A | L | 0.3851 | |
2 | A | L | 0.7850 | |
3 | V | L | 1.5342 | |
4 | L | L | 0.0000 | |
5 | T | L | -0.1791 | |
6 | Q | L | -0.4068 | |
7 | T | L | -0.5127 | |
8 | P | L | -0.2878 | |
9 | A | L | -0.3486 | |
10 | S | L | -0.6127 | |
11 | V | L | -0.2984 | |
12 | S | L | -0.8270 | |
13 | A | L | 0.0000 | |
14 | A | L | -0.5742 | |
15 | V | L | 0.6319 | |
16 | G | L | -0.5531 | |
17 | D | L | -1.1530 | |
18 | T | L | -0.6404 | |
19 | V | L | 0.0000 | |
20 | T | L | -0.1532 | |
21 | I | L | 0.0000 | |
22 | N | L | -0.7494 | |
23 | C | L | 0.0000 | |
24 | Q | L | -0.9304 | |
25 | S | L | 0.0000 | |
26 | S | L | -0.0042 | |
27 | P | L | -0.1674 | |
28 | S | L | -0.6161 | |
29 | V | L | 0.0000 | |
30 | T | L | -0.6468 | |
36 | S | L | -0.6389 | |
37 | N | L | -0.7527 | |
38 | Y | L | -0.0782 | |
39 | L | L | 0.0000 | |
40 | S | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | F | L | 0.0000 | |
43 | Q | L | 0.0000 | |
44 | Q | L | -1.1351 | |
45 | K | L | -1.5365 | |
46 | P | L | -1.1429 | |
47 | G | L | -1.3442 | |
48 | Q | L | -1.9103 | |
49 | P | L | -1.2337 | |
50 | P | L | 0.0000 | |
51 | K | L | -1.4549 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | -0.2261 | |
56 | D | L | -0.5934 | |
57 | A | L | 0.0000 | |
65 | S | L | -1.0672 | |
66 | D | L | -1.4187 | |
67 | L | L | -0.4247 | |
68 | A | L | -0.5320 | |
69 | S | L | -0.5336 | |
70 | G | L | -0.4659 | |
71 | V | L | -0.3030 | |
72 | P | L | -0.3660 | |
74 | S | L | -0.4652 | |
75 | R | L | -0.7545 | |
76 | F | L | 0.0000 | |
77 | S | L | -0.5905 | |
78 | G | L | -0.5807 | |
79 | S | L | -0.8024 | |
80 | G | L | -0.9340 | |
83 | S | L | -0.7907 | |
84 | G | L | -0.7630 | |
85 | T | L | -0.8737 | |
86 | Q | L | -1.2375 | |
87 | F | L | 0.0000 | |
88 | T | L | -0.6180 | |
89 | L | L | 0.0000 | |
90 | T | L | -0.3085 | |
91 | I | L | 0.0000 | |
92 | S | L | -0.6970 | |
93 | G | L | -0.7020 | |
94 | V | L | 0.0000 | |
95 | Q | L | -1.0339 | |
96 | S | L | -1.3043 | |
97 | D | L | -2.0781 | |
98 | D | L | 0.0000 | |
99 | A | L | -1.2769 | |
100 | A | L | 0.0000 | |
101 | T | L | -0.7585 | |
102 | Y | L | 0.0000 | |
103 | Y | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | L | L | 0.0000 | |
106 | G | L | 0.0000 | |
107 | E | L | 0.0000 | |
108 | Y | L | 0.0000 | |
109 | D | L | -1.8270 | |
113 | S | L | -0.9207 | |
114 | T | L | -0.5050 | |
115 | T | L | -0.2221 | |
116 | D | L | 0.0000 | |
117 | A | L | 0.3573 | |
118 | F | L | 0.1792 | |
119 | G | L | 0.0000 | |
120 | G | L | -0.6411 | |
121 | G | L | -0.7443 | |
122 | T | L | 0.0000 | |
123 | N | L | -1.0814 | |
124 | V | L | 0.0000 | |
125 | E | L | -1.7789 | |
126 | I | L | -1.0774 | |
127 | K | L | -1.5462 |