| Chain sequence(s) |
A: GKITFYEDRAFQGRSYETTTDCPNLQPYFSRCNSIRVESGCWMLYERPNYQGQQYLLRRGEYPDYQQWMGLSDSIRSCCLIPQTVSHRLRLYEREDHKGLMMELSEDCPSIQDRFHLSEIRSLHVLEGCWVLYELPNYRGRQYLLRPQEYRRCQDWGAMDAKAGSLRRVVDLY
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:50)
[INFO] Main: Simulation completed successfully. (00:02:51)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.7703 | |
| 2 | K | A | -1.4290 | |
| 3 | I | A | 0.0000 | |
| 4 | T | A | 0.0000 | |
| 5 | F | A | 0.0000 | |
| 6 | Y | A | -2.0495 | |
| 7 | E | A | 0.0000 | |
| 8 | D | A | -3.4959 | |
| 9 | R | A | -3.1466 | |
| 10 | A | A | -1.5488 | |
| 11 | F | A | -1.7593 | |
| 12 | Q | A | -2.6404 | |
| 13 | G | A | -2.6092 | |
| 14 | R | A | -2.5323 | |
| 15 | S | A | -1.4379 | |
| 16 | Y | A | -0.5409 | |
| 17 | E | A | -0.9084 | |
| 18 | T | A | 0.0000 | |
| 19 | T | A | -0.8975 | |
| 20 | T | A | -0.7228 | |
| 21 | D | A | -0.9572 | |
| 22 | C | A | -1.0765 | |
| 23 | P | A | -1.8109 | |
| 24 | N | A | -2.2766 | |
| 25 | L | A | 0.0000 | |
| 26 | Q | A | -2.0419 | |
| 27 | P | A | -0.8210 | |
| 28 | Y | A | -0.6397 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | -1.8095 | |
| 31 | R | A | -2.1607 | |
| 32 | C | A | 0.0000 | |
| 33 | N | A | -2.4890 | |
| 34 | S | A | 0.0000 | |
| 35 | I | A | 0.0000 | |
| 36 | R | A | -2.1371 | |
| 37 | V | A | 0.0000 | |
| 38 | E | A | -2.0501 | |
| 39 | S | A | -1.1045 | |
| 40 | G | A | 0.0000 | |
| 41 | C | A | 0.0000 | |
| 42 | W | A | 0.0000 | |
| 43 | M | A | 0.0000 | |
| 44 | L | A | 0.0000 | |
| 45 | Y | A | 0.0000 | |
| 46 | E | A | -1.9234 | |
| 47 | R | A | -2.9636 | |
| 48 | P | A | -2.5067 | |
| 49 | N | A | -2.1877 | |
| 50 | Y | A | -1.4929 | |
| 51 | Q | A | -1.8605 | |
| 52 | G | A | -1.2405 | |
| 53 | Q | A | -0.6373 | |
| 54 | Q | A | 0.0000 | |
| 55 | Y | A | 0.0000 | |
| 56 | L | A | -0.5367 | |
| 57 | L | A | 0.0000 | |
| 58 | R | A | -2.3990 | |
| 59 | R | A | -2.6750 | |
| 60 | G | A | -2.4206 | |
| 61 | E | A | -2.9313 | |
| 62 | Y | A | 0.0000 | |
| 63 | P | A | -2.0551 | |
| 64 | D | A | -2.5015 | |
| 65 | Y | A | 0.0000 | |
| 66 | Q | A | -1.7803 | |
| 67 | Q | A | -1.8474 | |
| 68 | W | A | -0.5628 | |
| 69 | M | A | 0.0518 | |
| 70 | G | A | -0.2794 | |
| 71 | L | A | 0.3288 | |
| 72 | S | A | -0.6197 | |
| 73 | D | A | -1.9335 | |
| 74 | S | A | -1.6143 | |
| 75 | I | A | 0.0000 | |
| 76 | R | A | -2.7210 | |
| 77 | S | A | 0.0000 | |
| 78 | C | A | 0.0000 | |
| 79 | C | A | 0.0000 | |
| 80 | L | A | -0.1405 | |
| 81 | I | A | 0.0785 | |
| 82 | P | A | 0.1173 | |
| 83 | Q | A | 0.4860 | |
| 84 | T | A | 0.5397 | |
| 85 | V | A | 1.5558 | |
| 86 | S | A | 0.0561 | |
| 87 | H | A | -1.4102 | |
| 88 | R | A | -2.3754 | |
| 89 | L | A | 0.0000 | |
| 90 | R | A | -0.7660 | |
| 91 | L | A | 0.0000 | |
| 92 | Y | A | 0.0000 | |
| 93 | E | A | -2.0134 | |
| 94 | R | A | -4.0997 | |
| 95 | E | A | -5.0035 | |
| 96 | D | A | -4.7674 | |
| 97 | H | A | -3.6563 | |
| 98 | K | A | -3.3988 | |
| 99 | G | A | -1.5970 | |
| 100 | L | A | 0.8083 | |
| 101 | M | A | 0.4338 | |
| 102 | M | A | 0.4511 | |
| 103 | E | A | -1.0189 | |
| 104 | L | A | -1.3201 | |
| 105 | S | A | -2.2260 | |
| 106 | E | A | -2.8240 | |
| 107 | D | A | -2.1934 | |
| 108 | C | A | 0.0000 | |
| 109 | P | A | -1.8187 | |
| 110 | S | A | 0.0000 | |
| 111 | I | A | 0.0000 | |
| 112 | Q | A | -2.6497 | |
| 113 | D | A | -3.1506 | |
| 114 | R | A | -2.8775 | |
| 115 | F | A | -1.1465 | |
| 116 | H | A | -2.2156 | |
| 117 | L | A | -1.5815 | |
| 118 | S | A | -1.6576 | |
| 119 | E | A | -2.6527 | |
| 120 | I | A | 0.0000 | |
| 121 | R | A | -4.0103 | |
| 122 | S | A | 0.0000 | |
| 123 | L | A | 0.0000 | |
| 124 | H | A | -1.9288 | |
| 125 | V | A | 0.0000 | |
| 126 | L | A | -1.3337 | |
| 127 | E | A | -1.6383 | |
| 128 | G | A | 0.0000 | |
| 129 | C | A | 0.0000 | |
| 130 | W | A | 0.0000 | |
| 131 | V | A | 0.0000 | |
| 132 | L | A | 0.0000 | |
| 133 | Y | A | 0.0000 | |
| 134 | E | A | -0.9699 | |
| 135 | L | A | -0.0337 | |
| 136 | P | A | -0.9423 | |
| 137 | N | A | -1.6646 | |
| 138 | Y | A | -1.3158 | |
| 139 | R | A | -1.6341 | |
| 140 | G | A | -0.6364 | |
| 141 | R | A | -0.5156 | |
| 142 | Q | A | 0.0000 | |
| 143 | Y | A | 0.0000 | |
| 144 | L | A | 0.0000 | |
| 145 | L | A | 0.0000 | |
| 146 | R | A | -1.0661 | |
| 147 | P | A | -1.5153 | |
| 148 | Q | A | -1.8068 | |
| 149 | E | A | -2.8546 | |
| 150 | Y | A | 0.0000 | |
| 151 | R | A | -4.6220 | |
| 152 | R | A | -4.3713 | |
| 153 | C | A | -2.4087 | |
| 154 | Q | A | -2.1641 | |
| 155 | D | A | -2.1344 | |
| 156 | W | A | 0.0000 | |
| 157 | G | A | -1.0707 | |
| 158 | A | A | 0.0000 | |
| 159 | M | A | 0.1084 | |
| 160 | D | A | -1.1335 | |
| 161 | A | A | -1.7472 | |
| 162 | K | A | -1.6369 | |
| 163 | A | A | 0.0000 | |
| 164 | G | A | 0.0000 | |
| 165 | S | A | 0.0000 | |
| 166 | L | A | 0.0000 | |
| 167 | R | A | -2.0962 | |
| 168 | R | A | -1.6924 | |
| 169 | V | A | 0.0000 | |
| 170 | V | A | 1.5138 | |
| 171 | D | A | 0.7883 | |
| 172 | L | A | 0.6817 | |
| 173 | Y | A | 1.1905 |