| Chain sequence(s) |
A: GIVEQCCTSICSLDQLEDYCNDKDHELCGSHLVEALYLVCGDRGFFYTPKK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:51)
[INFO] Main: Simulation completed successfully. (00:00:52)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.0482 | |
| 2 | I | A | -0.9332 | |
| 3 | V | A | 0.0000 | |
| 4 | E | A | -1.9726 | |
| 5 | Q | A | -1.1559 | |
| 6 | C | A | 0.0000 | |
| 7 | C | A | -0.3316 | |
| 8 | T | A | -0.3294 | |
| 9 | S | A | 0.8631 | |
| 10 | I | A | 2.7663 | |
| 11 | C | A | 0.0000 | |
| 12 | S | A | -0.3403 | |
| 13 | L | A | -1.4985 | |
| 14 | D | A | -2.7405 | |
| 15 | Q | A | -2.1809 | |
| 16 | L | A | -1.6451 | |
| 17 | E | A | -3.2098 | |
| 18 | D | A | -3.5607 | |
| 19 | Y | A | -2.7517 | |
| 20 | C | A | -2.8547 | |
| 21 | N | A | -3.6385 | |
| 22 | D | A | -4.0009 | |
| 23 | K | A | -3.8682 | |
| 24 | D | A | -3.7804 | |
| 25 | H | A | -3.2077 | |
| 26 | E | A | -2.9357 | |
| 27 | L | A | -1.3772 | |
| 28 | C | A | -1.0730 | |
| 29 | G | A | -0.9089 | |
| 30 | S | A | -0.9360 | |
| 31 | H | A | -1.5101 | |
| 32 | L | A | 0.0000 | |
| 33 | V | A | 0.1774 | |
| 34 | E | A | -0.8453 | |
| 35 | A | A | 0.0814 | |
| 36 | L | A | 0.0000 | |
| 37 | Y | A | 1.1157 | |
| 38 | L | A | 1.7403 | |
| 39 | V | A | 0.6567 | |
| 40 | C | A | 0.0000 | |
| 41 | G | A | -0.8215 | |
| 42 | D | A | -2.4537 | |
| 43 | R | A | -2.3660 | |
| 44 | G | A | -0.6108 | |
| 45 | F | A | 1.1194 | |
| 46 | F | A | 2.7574 | |
| 47 | Y | A | 1.9235 | |
| 48 | T | A | 0.1786 | |
| 49 | P | A | -1.2511 | |
| 50 | K | A | -2.7441 | |
| 51 | K | A | -2.5774 |