| Chain sequence(s) |
A: KPETHINLKVSDGSSEIFFKIKKTTPLRRLMEAFAKRQGKEMDSLRFLYDGIRIQADQTPEDLDMEDNDIIEAHREQIG
C: SSVPTKLEVVAATPTSLLISWDASSSSVSYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYYSYYDLYYSYSPSSINYRT B: THINLKVSDGSSEIFFKIKKTTPLRRLMEAFAKRQGKEMDSLRFLYDGIRIQADQTPEDLDMEDNDIIEAHHRE D: SSVPTKLEVVAATPTSLLISWDASSSSVSYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYYSYYDLYYSYSPSSINYRT input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:35)
[INFO] Main: Simulation completed successfully. (00:04:37)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 19 | K | A | -2.6636 | |
| 20 | P | A | -2.2306 | |
| 21 | E | A | -2.5441 | |
| 22 | T | A | -1.5661 | |
| 23 | H | A | -1.0743 | |
| 24 | I | A | -1.4430 | |
| 25 | N | A | -1.2084 | |
| 26 | L | A | 0.0000 | |
| 27 | K | A | -0.8201 | |
| 28 | V | A | 0.0000 | |
| 29 | S | A | -1.4364 | |
| 30 | D | A | -2.0553 | |
| 31 | G | A | -1.4411 | |
| 32 | S | A | -0.9263 | |
| 33 | S | A | -1.2067 | |
| 34 | E | A | -1.8385 | |
| 35 | I | A | 0.0000 | |
| 36 | F | A | -0.1087 | |
| 37 | F | A | 0.0000 | |
| 38 | K | A | -0.6074 | |
| 39 | I | A | 0.0000 | |
| 40 | K | A | -1.0194 | |
| 41 | K | A | -2.0510 | |
| 42 | T | A | -1.1769 | |
| 43 | T | A | 0.0000 | |
| 44 | P | A | -1.9959 | |
| 45 | L | A | 0.0000 | |
| 46 | R | A | -2.0476 | |
| 47 | R | A | -0.8347 | |
| 48 | L | A | 0.0000 | |
| 49 | M | A | 0.0000 | |
| 50 | E | A | 0.0000 | |
| 51 | A | A | 0.0000 | |
| 52 | F | A | 0.0000 | |
| 53 | A | A | 0.0000 | |
| 54 | K | A | -3.1918 | |
| 55 | R | A | -2.5705 | |
| 56 | Q | A | -2.1673 | |
| 57 | G | A | -2.4399 | |
| 58 | K | A | -3.4199 | |
| 59 | E | A | -3.4661 | |
| 60 | M | A | -2.8039 | |
| 61 | D | A | -3.2077 | |
| 62 | S | A | -3.1777 | |
| 63 | L | A | 0.0000 | |
| 64 | R | A | -2.8705 | |
| 65 | F | A | 0.0000 | |
| 66 | L | A | -1.1384 | |
| 67 | Y | A | 0.0000 | |
| 68 | D | A | -1.8368 | |
| 69 | G | A | -1.0510 | |
| 70 | I | A | -0.4638 | |
| 71 | R | A | -1.6831 | |
| 72 | I | A | 0.0000 | |
| 73 | Q | A | -2.1440 | |
| 74 | A | A | 0.0000 | |
| 75 | D | A | -2.8712 | |
| 76 | Q | A | -2.6017 | |
| 77 | T | A | -2.6183 | |
| 78 | P | A | 0.0000 | |
| 79 | E | A | -3.8364 | |
| 80 | D | A | -3.6045 | |
| 81 | L | A | 0.0000 | |
| 82 | D | A | -3.5009 | |
| 83 | M | A | 0.0000 | |
| 84 | E | A | -3.3161 | |
| 85 | D | A | -2.6222 | |
| 86 | N | A | -2.1292 | |
| 87 | D | A | -1.3714 | |
| 88 | I | A | 0.1145 | |
| 89 | I | A | 0.0000 | |
| 90 | E | A | -2.3324 | |
| 91 | A | A | 0.0000 | |
| 92 | H | A | -2.8500 | |
| 93 | R | A | -3.3915 | |
| 94 | E | A | -3.6249 | |
| 95 | Q | A | -3.0390 | |
| 96 | I | A | -2.3825 | |
| 97 | G | A | -2.1675 | |
| 22 | T | B | -0.8712 | |
| 23 | H | B | -1.1418 | |
| 24 | I | B | -1.9237 | |
| 25 | N | B | -1.6635 | |
| 26 | L | B | 0.0000 | |
| 27 | K | B | -1.0653 | |
| 28 | V | B | 0.0000 | |
| 29 | S | B | -1.4183 | |
| 30 | D | B | -1.9836 | |
| 31 | G | B | -1.3681 | |
| 32 | S | B | -0.8831 | |
| 33 | S | B | -1.1167 | |
| 34 | E | B | -1.5091 | |
| 35 | I | B | 0.0000 | |
| 36 | F | B | -0.2384 | |
| 37 | F | B | 0.0000 | |
| 38 | K | B | -0.9917 | |
| 39 | I | B | 0.0000 | |
| 40 | K | B | -1.5986 | |
| 41 | K | B | -2.2326 | |
| 42 | T | B | -1.1668 | |
| 43 | T | B | -1.4401 | |
| 44 | P | B | -1.7207 | |
| 45 | L | B | 0.0000 | |
| 46 | R | B | -2.0289 | |
| 47 | R | B | -1.0728 | |
| 48 | L | B | 0.0000 | |
| 49 | M | B | 0.0000 | |
| 50 | E | B | -1.9509 | |
| 51 | A | B | 0.0000 | |
| 52 | F | B | 0.0000 | |
| 53 | A | B | 0.0000 | |
| 54 | K | B | -3.0993 | |
| 55 | R | B | -2.4853 | |
| 56 | Q | B | -2.1082 | |
| 57 | G | B | -2.2043 | |
| 58 | K | B | -3.1548 | |
| 59 | E | B | -3.4089 | |
| 60 | M | B | -2.4794 | |
| 61 | D | B | -3.0389 | |
| 62 | S | B | -2.8487 | |
| 63 | L | B | 0.0000 | |
| 64 | R | B | -2.1758 | |
| 65 | F | B | 0.0000 | |
| 66 | L | B | -0.7793 | |
| 67 | Y | B | -0.8150 | |
| 68 | D | B | -2.0494 | |
| 69 | G | B | -0.9440 | |
| 70 | I | B | -0.4719 | |
| 71 | R | B | -0.6120 | |
| 72 | I | B | 0.0000 | |
| 73 | Q | B | -1.0133 | |
| 74 | A | B | -1.8435 | |
| 75 | D | B | -2.0222 | |
| 76 | Q | B | 0.0000 | |
| 77 | T | B | -1.6534 | |
| 78 | P | B | 0.0000 | |
| 79 | E | B | -2.7916 | |
| 80 | D | B | -1.5510 | |
| 81 | L | B | 0.0000 | |
| 82 | D | B | -2.8382 | |
| 83 | M | B | 0.0000 | |
| 84 | E | B | -3.4467 | |
| 85 | D | B | -3.2267 | |
| 86 | N | B | -2.5065 | |
| 87 | D | B | -1.6071 | |
| 88 | I | B | -0.4482 | |
| 89 | I | B | 0.0000 | |
| 90 | E | B | -1.9341 | |
| 91 | A | B | 0.0000 | |
| 92 | H | B | -2.7226 | |
| 93 | R | B | -3.5338 | |
| 94 | E | B | -3.3090 | |
| 2 | S | C | -0.1948 | |
| 3 | S | C | -0.2244 | |
| 4 | V | C | 0.0161 | |
| 5 | P | C | 0.0000 | |
| 6 | T | C | -1.2106 | |
| 7 | K | C | -2.2735 | |
| 8 | L | C | 0.0000 | |
| 9 | E | C | -1.7224 | |
| 10 | V | C | 0.1197 | |
| 11 | V | C | 1.5151 | |
| 12 | A | C | 0.8781 | |
| 13 | A | C | 0.3206 | |
| 14 | T | C | -0.1930 | |
| 15 | P | C | -0.8122 | |
| 16 | T | C | -0.5444 | |
| 17 | S | C | -0.3071 | |
| 18 | L | C | 0.0000 | |
| 19 | L | C | 0.6946 | |
| 20 | I | C | 0.0000 | |
| 21 | S | C | -0.5132 | |
| 22 | W | C | 0.0000 | |
| 23 | D | C | -1.2198 | |
| 24 | A | C | -0.5905 | |
| 25 | S | C | -0.4894 | |
| 26 | S | C | -0.4370 | |
| 27 | S | C | -0.9478 | |
| 28 | S | C | -0.4009 | |
| 29 | V | C | 0.0000 | |
| 30 | S | C | 0.0000 | |
| 31 | Y | C | 0.0000 | |
| 32 | Y | C | 0.0000 | |
| 33 | R | C | -0.3043 | |
| 34 | I | C | 0.0000 | |
| 35 | T | C | -0.4643 | |
| 36 | Y | C | 0.0000 | |
| 37 | G | C | 0.0000 | |
| 38 | E | C | -1.7050 | |
| 39 | T | C | -1.3676 | |
| 40 | G | C | -1.3020 | |
| 41 | G | C | -1.4401 | |
| 42 | N | C | -1.5162 | |
| 43 | S | C | -0.8953 | |
| 44 | P | C | -0.3784 | |
| 45 | V | C | 0.3684 | |
| 46 | Q | C | -0.7969 | |
| 47 | E | C | -1.3727 | |
| 48 | F | C | -0.4269 | |
| 49 | T | C | -0.1224 | |
| 50 | V | C | -0.0525 | |
| 51 | P | C | -0.3017 | |
| 52 | G | C | 0.0000 | |
| 53 | S | C | -0.5505 | |
| 54 | S | C | -0.1884 | |
| 55 | S | C | -0.2650 | |
| 56 | T | C | -0.0378 | |
| 57 | A | C | 0.1407 | |
| 58 | T | C | 0.0641 | |
| 59 | I | C | 0.0000 | |
| 60 | S | C | -0.4728 | |
| 61 | G | C | -0.6835 | |
| 62 | L | C | 0.0000 | |
| 63 | S | C | -0.9012 | |
| 64 | P | C | -1.0262 | |
| 65 | G | C | -1.1325 | |
| 66 | V | C | -1.1235 | |
| 67 | D | C | -1.9804 | |
| 68 | Y | C | 0.0000 | |
| 69 | T | C | -0.8643 | |
| 70 | I | C | 0.0000 | |
| 71 | T | C | -0.3797 | |
| 72 | V | C | 0.0000 | |
| 73 | Y | C | 0.2064 | |
| 74 | A | C | 0.0000 | |
| 75 | Y | C | 0.0000 | |
| 76 | Y | C | 0.1971 | |
| 77 | S | C | 0.0825 | |
| 78 | Y | C | 0.4717 | |
| 79 | Y | C | 0.6312 | |
| 80 | D | C | -0.4703 | |
| 81 | L | C | 0.0000 | |
| 82 | Y | C | 0.0000 | |
| 83 | Y | C | 0.2706 | |
| 84 | S | C | 0.0000 | |
| 85 | Y | C | -0.0762 | |
| 86 | S | C | -0.1652 | |
| 87 | P | C | 0.0627 | |
| 88 | S | C | 0.0000 | |
| 89 | S | C | -0.4438 | |
| 90 | I | C | -0.5293 | |
| 91 | N | C | -1.7319 | |
| 92 | Y | C | -1.4395 | |
| 93 | R | C | -2.4064 | |
| 94 | T | C | -1.3552 | |
| 2 | S | D | -0.1230 | |
| 3 | S | D | -0.0001 | |
| 4 | V | D | 0.2402 | |
| 5 | P | D | 0.0000 | |
| 6 | T | D | -1.2228 | |
| 7 | K | D | -2.3358 | |
| 8 | L | D | 0.0000 | |
| 9 | E | D | -1.7436 | |
| 10 | V | D | 0.2414 | |
| 11 | V | D | 1.6372 | |
| 12 | A | D | 0.9542 | |
| 13 | A | D | 0.5482 | |
| 14 | T | D | -0.1819 | |
| 15 | P | D | -0.7888 | |
| 16 | T | D | -0.5265 | |
| 17 | S | D | -0.3006 | |
| 18 | L | D | 0.0000 | |
| 19 | L | D | 0.8164 | |
| 20 | I | D | 0.0000 | |
| 21 | S | D | -0.5363 | |
| 22 | W | D | 0.0000 | |
| 23 | D | D | -1.5748 | |
| 24 | A | D | -0.8120 | |
| 25 | S | D | -0.6438 | |
| 26 | S | D | -0.4843 | |
| 27 | S | D | -0.4761 | |
| 28 | S | D | -0.4097 | |
| 29 | V | D | 0.0000 | |
| 30 | S | D | -0.0840 | |
| 31 | Y | D | 0.0499 | |
| 32 | Y | D | 0.0000 | |
| 33 | R | D | -0.2876 | |
| 34 | I | D | 0.0000 | |
| 35 | T | D | 0.0000 | |
| 36 | Y | D | -0.6043 | |
| 37 | G | D | -1.2554 | |
| 38 | E | D | -2.2496 | |
| 39 | T | D | -1.5861 | |
| 40 | G | D | -1.4701 | |
| 41 | G | D | -1.7922 | |
| 42 | N | D | -1.8295 | |
| 43 | S | D | -1.1642 | |
| 44 | P | D | -0.6228 | |
| 45 | V | D | -0.1729 | |
| 46 | Q | D | -1.3598 | |
| 47 | E | D | -1.5548 | |
| 48 | F | D | -0.4509 | |
| 49 | T | D | -0.0779 | |
| 50 | V | D | 0.1532 | |
| 51 | P | D | -0.2084 | |
| 52 | G | D | 0.0000 | |
| 53 | S | D | -0.3859 | |
| 54 | S | D | -0.3125 | |
| 55 | S | D | -0.4179 | |
| 56 | T | D | -0.0414 | |
| 57 | A | D | 0.0000 | |
| 58 | T | D | 0.1022 | |
| 59 | I | D | 0.0000 | |
| 60 | S | D | -0.4653 | |
| 61 | G | D | -0.6820 | |
| 62 | L | D | 0.0000 | |
| 63 | S | D | -0.8971 | |
| 64 | P | D | -0.9420 | |
| 65 | G | D | -1.0237 | |
| 66 | V | D | -0.9949 | |
| 67 | D | D | -1.8785 | |
| 68 | Y | D | 0.0000 | |
| 69 | T | D | -0.9693 | |
| 70 | I | D | 0.0000 | |
| 71 | T | D | -0.1871 | |
| 72 | V | D | 0.0000 | |
| 73 | Y | D | 0.2832 | |
| 74 | A | D | 0.0000 | |
| 75 | Y | D | 0.0000 | |
| 76 | Y | D | 0.2080 | |
| 77 | S | D | 0.2031 | |
| 78 | Y | D | 0.5410 | |
| 79 | Y | D | 0.9650 | |
| 80 | D | D | -0.2829 | |
| 81 | L | D | 0.0000 | |
| 82 | Y | D | 0.3258 | |
| 83 | Y | D | 0.0000 | |
| 84 | S | D | 0.0000 | |
| 85 | Y | D | 0.0218 | |
| 86 | S | D | -0.0638 | |
| 87 | P | D | 0.1628 | |
| 88 | S | D | -0.2742 | |
| 89 | S | D | -0.4527 | |
| 90 | I | D | -0.5521 | |
| 91 | N | D | -1.7311 | |
| 92 | Y | D | -1.3603 | |
| 93 | R | D | -2.3131 | |
| 94 | T | D | -1.2801 |