| Chain sequence(s) |
A: LPFGEVFNATRFASVYAWNRKRISNVADYSVLYNSASFSTFKYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPNGVEGFNYFPLQSYGFQPTNGVGYQPYRVVVLSFELAIRMTQSPSFLSASVGDRVTITRASQDINSFLAWYQQRPGKAPKLLIYGASNLETGVPSRFSGGGSGTDFTLTISSLQPEDIATYYQQYDKLPTFGQGTRLEIVQLLETGGGLVKPGGSLRLSAASGFSLSDYYMNWIRQAPGKGLEWVAYISSSSGYTNYGDSVKGRFTISRDAKNSLYLQMNSLRVEDTAVYYVRDRDDFWSGYYKWGLGTLVTVS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:01)
[INFO] Main: Simulation completed successfully. (00:04:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 2.1973 | |
| 3 | P | A | -0.1536 | |
| 4 | F | A | -0.4701 | |
| 5 | G | A | -1.4638 | |
| 6 | E | A | -2.3736 | |
| 7 | V | A | -1.3354 | |
| 8 | F | A | 0.0000 | |
| 9 | N | A | -1.6861 | |
| 10 | A | A | -1.0108 | |
| 11 | T | A | -0.6333 | |
| 12 | R | A | -0.8190 | |
| 13 | F | A | 0.0000 | |
| 14 | A | A | 0.0000 | |
| 15 | S | A | 0.0000 | |
| 16 | V | A | 0.0000 | |
| 17 | Y | A | 0.0000 | |
| 18 | A | A | 0.0000 | |
| 19 | W | A | 0.0000 | |
| 20 | N | A | -1.9760 | |
| 21 | R | A | -2.3810 | |
| 22 | K | A | -3.0583 | |
| 23 | R | A | -2.7455 | |
| 24 | I | A | -0.8992 | |
| 25 | S | A | -0.9233 | |
| 26 | N | A | -0.8759 | |
| 28 | V | A | 1.9810 | |
| 29 | A | A | 1.2093 | |
| 30 | D | A | 0.4155 | |
| 31 | Y | A | 0.0000 | |
| 32 | S | A | 0.1596 | |
| 33 | V | A | 1.1249 | |
| 34 | L | A | 0.6666 | |
| 35 | Y | A | 0.8425 | |
| 36 | N | A | -0.2132 | |
| 37 | S | A | 0.1197 | |
| 38 | A | A | 0.0546 | |
| 39 | S | A | -0.2866 | |
| 40 | F | A | 0.1205 | |
| 41 | S | A | -0.1070 | |
| 42 | T | A | -0.3470 | |
| 43 | F | A | -0.2068 | |
| 44 | K | A | -1.1867 | |
| 46 | Y | A | -0.5109 | |
| 47 | G | A | -0.4536 | |
| 48 | V | A | 0.0036 | |
| 49 | S | A | -0.5522 | |
| 50 | P | A | -0.7723 | |
| 51 | T | A | -0.8910 | |
| 52 | K | A | -1.8138 | |
| 53 | L | A | 0.0000 | |
| 54 | N | A | -1.6447 | |
| 55 | D | A | -2.0931 | |
| 56 | L | A | 0.0459 | |
| 57 | C | A | 1.2914 | |
| 58 | F | A | 1.2930 | |
| 59 | T | A | 0.2655 | |
| 60 | N | A | 0.0000 | |
| 61 | V | A | -0.2534 | |
| 62 | Y | A | -1.2307 | |
| 63 | A | A | 0.0000 | |
| 64 | D | A | 0.0000 | |
| 65 | S | A | -0.8709 | |
| 66 | F | A | 0.0000 | |
| 67 | V | A | 0.0000 | |
| 68 | I | A | 0.0000 | |
| 69 | R | A | -0.5096 | |
| 70 | G | A | -0.9586 | |
| 71 | D | A | -1.9978 | |
| 72 | E | A | -1.8663 | |
| 73 | V | A | 0.0000 | |
| 74 | R | A | -2.5544 | |
| 75 | Q | A | -2.0249 | |
| 76 | I | A | 0.0000 | |
| 77 | A | A | -1.2628 | |
| 78 | P | A | -1.6712 | |
| 79 | G | A | -1.8668 | |
| 80 | Q | A | -1.3636 | |
| 81 | T | A | -0.9959 | |
| 82 | G | A | -1.1830 | |
| 83 | K | A | -1.5336 | |
| 84 | I | A | 0.0000 | |
| 85 | A | A | 0.0000 | |
| 86 | D | A | -1.7559 | |
| 87 | Y | A | -1.3515 | |
| 88 | N | A | 0.0000 | |
| 89 | Y | A | 0.0000 | |
| 90 | K | A | -1.5418 | |
| 91 | L | A | 0.0000 | |
| 92 | P | A | -1.8851 | |
| 93 | D | A | -3.0023 | |
| 94 | D | A | -2.8059 | |
| 95 | F | A | 0.0000 | |
| 96 | T | A | -0.6534 | |
| 97 | G | A | -0.3392 | |
| 99 | V | A | 0.0000 | |
| 100 | I | A | 0.0000 | |
| 101 | A | A | 0.0000 | |
| 102 | W | A | -0.1804 | |
| 103 | N | A | -0.5151 | |
| 104 | S | A | 0.0000 | |
| 105 | N | A | -0.8145 | |
| 106 | N | A | -1.4994 | |
| 107 | L | A | -0.6036 | |
| 108 | D | A | 0.0000 | |
| 109 | S | A | -0.8827 | |
| 110 | K | A | -1.1209 | |
| 111 | V | A | 0.5467 | |
| 112 | G | A | 0.0761 | |
| 113 | G | A | 0.0000 | |
| 114 | N | A | 0.0000 | |
| 115 | Y | A | 0.0778 | |
| 116 | N | A | 0.0054 | |
| 117 | Y | A | 0.0993 | |
| 118 | L | A | 0.1828 | |
| 119 | Y | A | 0.1179 | |
| 120 | R | A | 0.0000 | |
| 121 | L | A | 0.2761 | |
| 122 | F | A | 0.1669 | |
| 123 | R | A | -1.2973 | |
| 124 | K | A | -2.1774 | |
| 125 | S | A | -1.8892 | |
| 126 | N | A | -2.4910 | |
| 127 | L | A | 0.0000 | |
| 128 | K | A | -2.5937 | |
| 129 | P | A | -1.6060 | |
| 130 | F | A | -0.9917 | |
| 131 | E | A | -2.1540 | |
| 132 | R | A | -2.3770 | |
| 133 | D | A | -1.2151 | |
| 134 | I | A | -0.2416 | |
| 135 | S | A | -0.6162 | |
| 136 | T | A | 0.0000 | |
| 137 | E | A | -1.3073 | |
| 138 | I | A | -0.1843 | |
| 139 | Y | A | -0.6241 | |
| 140 | Q | A | -1.6167 | |
| 141 | A | A | -0.7765 | |
| 142 | G | A | -0.7347 | |
| 143 | S | A | -0.7284 | |
| 144 | T | A | -0.8504 | |
| 145 | P | A | -0.8779 | |
| 147 | N | A | -1.1083 | |
| 148 | G | A | -0.3005 | |
| 149 | V | A | 0.9243 | |
| 150 | E | A | 0.3004 | |
| 151 | G | A | 0.3274 | |
| 152 | F | A | 0.9529 | |
| 153 | N | A | -0.7968 | |
| 155 | Y | A | 0.7051 | |
| 156 | F | A | 0.6156 | |
| 157 | P | A | 0.0000 | |
| 158 | L | A | 0.0000 | |
| 159 | Q | A | -0.2119 | |
| 160 | S | A | -0.0340 | |
| 161 | Y | A | 0.0000 | |
| 162 | G | A | 0.0809 | |
| 163 | F | A | 0.0000 | |
| 164 | Q | A | -0.5879 | |
| 165 | P | A | -0.6066 | |
| 166 | T | A | -0.0842 | |
| 167 | N | A | 0.1155 | |
| 168 | G | A | 0.5413 | |
| 169 | V | A | 1.4192 | |
| 170 | G | A | 0.2609 | |
| 171 | Y | A | 0.8784 | |
| 172 | Q | A | 0.0521 | |
| 173 | P | A | 0.0000 | |
| 174 | Y | A | -0.2321 | |
| 175 | R | A | 0.0000 | |
| 176 | V | A | 0.0000 | |
| 177 | V | A | 0.0000 | |
| 178 | V | A | 0.0000 | |
| 179 | L | A | 0.0000 | |
| 180 | S | A | -0.1832 | |
| 181 | F | A | 0.5040 | |
| 182 | E | A | 0.1443 | |
| 183 | L | A | 1.6546 | |
| 184 | A | A | -0.2516 | |
| 185 | I | A | 0.0000 | |
| 186 | R | A | -2.1234 | |
| 187 | M | A | -1.6864 | |
| 188 | T | A | -1.4891 | |
| 189 | Q | A | 0.0000 | |
| 190 | S | A | -0.7851 | |
| 191 | P | A | -0.2815 | |
| 192 | S | A | -0.4599 | |
| 193 | F | A | -0.0317 | |
| 194 | L | A | 0.0000 | |
| 195 | S | A | -0.7002 | |
| 196 | A | A | -0.6602 | |
| 197 | S | A | -0.3095 | |
| 198 | V | A | 0.4441 | |
| 199 | G | A | -0.9970 | |
| 200 | D | A | -2.0744 | |
| 201 | R | A | -2.5131 | |
| 202 | V | A | -1.0649 | |
| 203 | T | A | -0.4181 | |
| 204 | I | A | 0.0000 | |
| 205 | T | A | -0.7348 | |
| 207 | R | A | -2.6671 | |
| 208 | A | A | -2.0390 | |
| 209 | S | A | -1.5350 | |
| 210 | Q | A | -1.6125 | |
| 211 | D | A | -1.4911 | |
| 212 | I | A | 0.0000 | |
| 213 | N | A | -0.4042 | |
| 214 | S | A | -0.4663 | |
| 215 | F | A | 0.0000 | |
| 216 | L | A | 0.0000 | |
| 217 | A | A | 0.0000 | |
| 218 | W | A | 0.0000 | |
| 219 | Y | A | 0.0000 | |
| 220 | Q | A | 0.0000 | |
| 221 | Q | A | -1.4745 | |
| 222 | R | A | -2.1494 | |
| 223 | P | A | -1.6395 | |
| 224 | G | A | -1.4489 | |
| 225 | K | A | -2.0478 | |
| 226 | A | A | -0.8741 | |
| 227 | P | A | 0.0000 | |
| 228 | K | A | -1.5939 | |
| 229 | L | A | 0.0000 | |
| 230 | L | A | 0.0000 | |
| 231 | I | A | 0.0000 | |
| 232 | Y | A | 0.0000 | |
| 233 | G | A | 0.0000 | |
| 234 | A | A | -0.4833 | |
| 235 | S | A | -0.6001 | |
| 236 | N | A | -0.4524 | |
| 237 | L | A | 0.1774 | |
| 238 | E | A | 0.0000 | |
| 239 | T | A | -0.1723 | |
| 240 | G | A | -0.4218 | |
| 241 | V | A | -0.2118 | |
| 242 | P | A | -0.3776 | |
| 243 | S | A | -0.4206 | |
| 244 | R | A | -0.7197 | |
| 245 | F | A | 0.0000 | |
| 246 | S | A | -0.3970 | |
| 247 | G | A | -0.5813 | |
| 248 | G | A | -0.8769 | |
| 249 | G | A | -1.3048 | |
| 250 | S | A | -0.9977 | |
| 251 | G | A | -1.3178 | |
| 252 | T | A | -1.5748 | |
| 253 | D | A | -1.8680 | |
| 254 | F | A | 0.0000 | |
| 255 | T | A | -0.7572 | |
| 256 | L | A | 0.0000 | |
| 257 | T | A | -0.5306 | |
| 258 | I | A | 0.0000 | |
| 259 | S | A | -1.5314 | |
| 260 | S | A | -1.2419 | |
| 261 | L | A | 0.0000 | |
| 262 | Q | A | -1.0286 | |
| 263 | P | A | -0.9185 | |
| 264 | E | A | -1.9542 | |
| 265 | D | A | 0.0000 | |
| 266 | I | A | -1.1165 | |
| 267 | A | A | 0.0000 | |
| 268 | T | A | -1.1487 | |
| 269 | Y | A | 0.0000 | |
| 270 | Y | A | 0.0000 | |
| 272 | Q | A | 0.0000 | |
| 273 | Q | A | 0.0000 | |
| 274 | Y | A | 0.0000 | |
| 275 | D | A | 0.0000 | |
| 276 | K | A | -0.2595 | |
| 277 | L | A | 0.3811 | |
| 278 | P | A | -0.0690 | |
| 279 | T | A | -0.4903 | |
| 280 | F | A | 0.0000 | |
| 281 | G | A | 0.0000 | |
| 282 | Q | A | -1.8314 | |
| 283 | G | A | -1.3074 | |
| 284 | T | A | 0.0000 | |
| 285 | R | A | -1.6722 | |
| 286 | L | A | 0.0000 | |
| 287 | E | A | -1.1925 | |
| 288 | I | A | -0.0699 | |
| 289 | V | A | 1.1041 | |
| 290 | Q | A | 0.2352 | |
| 291 | L | A | 1.0196 | |
| 292 | L | A | 1.6360 | |
| 293 | E | A | 0.9457 | |
| 294 | T | A | 0.0736 | |
| 295 | G | A | -0.8252 | |
| 296 | G | A | -0.0209 | |
| 297 | G | A | 0.4939 | |
| 298 | L | A | 1.4497 | |
| 299 | V | A | 0.1155 | |
| 300 | K | A | -1.4013 | |
| 301 | P | A | -1.3656 | |
| 302 | G | A | -1.1373 | |
| 303 | G | A | -0.9846 | |
| 304 | S | A | -1.2619 | |
| 305 | L | A | -1.0072 | |
| 306 | R | A | -2.2520 | |
| 307 | L | A | 0.0000 | |
| 308 | S | A | -0.5232 | |
| 310 | A | A | -0.0607 | |
| 311 | A | A | 0.0000 | |
| 312 | S | A | -0.1395 | |
| 313 | G | A | -0.6523 | |
| 314 | F | A | -0.0621 | |
| 315 | S | A | -0.5571 | |
| 316 | L | A | 0.0000 | |
| 317 | S | A | -1.3499 | |
| 318 | D | A | -1.8172 | |
| 319 | Y | A | -0.6346 | |
| 320 | Y | A | -0.0711 | |
| 321 | M | A | 0.0000 | |
| 322 | N | A | 0.0000 | |
| 323 | W | A | 0.0000 | |
| 324 | I | A | 0.0000 | |
| 325 | R | A | 0.0000 | |
| 326 | Q | A | -0.5729 | |
| 327 | A | A | -1.0508 | |
| 328 | P | A | -1.2903 | |
| 329 | G | A | -1.5765 | |
| 330 | K | A | -2.4603 | |
| 331 | G | A | -1.6931 | |
| 332 | L | A | 0.0000 | |
| 333 | E | A | -0.9676 | |
| 334 | W | A | -0.2208 | |
| 335 | V | A | 0.0000 | |
| 336 | A | A | 0.0000 | |
| 337 | Y | A | 0.2884 | |
| 338 | I | A | 0.0000 | |
| 339 | S | A | 0.0000 | |
| 340 | S | A | -0.5735 | |
| 341 | S | A | -0.8295 | |
| 342 | S | A | -0.2722 | |
| 343 | G | A | -0.0545 | |
| 344 | Y | A | 1.0226 | |
| 345 | T | A | 0.4287 | |
| 346 | N | A | -0.4637 | |
| 347 | Y | A | -1.0812 | |
| 348 | G | A | -1.4941 | |
| 349 | D | A | -2.4884 | |
| 350 | S | A | -1.6957 | |
| 351 | V | A | 0.0000 | |
| 352 | K | A | -2.6601 | |
| 353 | G | A | -1.7598 | |
| 354 | R | A | -1.2508 | |
| 355 | F | A | 0.0000 | |
| 356 | T | A | -0.9877 | |
| 357 | I | A | 0.0000 | |
| 358 | S | A | -0.5163 | |
| 359 | R | A | -1.0984 | |
| 360 | D | A | -1.6157 | |
| 362 | A | A | -1.2071 | |
| 363 | K | A | -2.1359 | |
| 364 | N | A | -1.4971 | |
| 365 | S | A | -0.8189 | |
| 366 | L | A | 0.0000 | |
| 367 | Y | A | 0.0000 | |
| 368 | L | A | 0.0000 | |
| 369 | Q | A | -1.6162 | |
| 370 | M | A | 0.0000 | |
| 371 | N | A | -1.2655 | |
| 372 | S | A | -0.9569 | |
| 373 | L | A | 0.0000 | |
| 374 | R | A | -1.2501 | |
| 375 | V | A | 0.0981 | |
| 376 | E | A | -1.3652 | |
| 377 | D | A | 0.0000 | |
| 378 | T | A | 0.1400 | |
| 379 | A | A | 0.0000 | |
| 380 | V | A | 1.0331 | |
| 381 | Y | A | 0.0000 | |
| 382 | Y | A | 0.0000 | |
| 384 | V | A | 0.0000 | |
| 385 | R | A | 0.0000 | |
| 386 | D | A | 0.0000 | |
| 387 | R | A | -1.1764 | |
| 388 | D | A | -1.4916 | |
| 389 | D | A | -1.7845 | |
| 390 | F | A | -0.4191 | |
| 391 | W | A | -0.1465 | |
| 392 | S | A | -0.1973 | |
| 393 | G | A | 0.0000 | |
| 394 | Y | A | 0.0000 | |
| 395 | Y | A | 0.0000 | |
| 396 | K | A | -0.9469 | |
| 398 | W | A | 0.3451 | |
| 399 | G | A | 0.0000 | |
| 400 | L | A | 1.5888 | |
| 401 | G | A | 1.0727 | |
| 402 | T | A | 0.0000 | |
| 403 | L | A | 1.6922 | |
| 404 | V | A | 0.0000 | |
| 405 | T | A | 0.5363 | |
| 406 | V | A | 0.0000 | |
| 407 | S | A | -0.3564 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine