Project name: query_structure

Status: done

Started: 2026-03-16 20:09:19
Settings
Chain sequence(s) D: EICLLPLDYGPCRALLLRYYYDRYTQSCRQFLYGGCEGNANNFYTWEACDDACWRI
input PDB
Selected Chain(s) D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with D chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:18)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:18)
Show buried residues

Minimal score value
-2.6084
Maximal score value
2.1862
Average score
-0.272
Total score value
-15.2293

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
3 E D -0.9449
4 I D 0.2370
5 C D 0.0000
6 L D 0.4689
7 L D 0.2540
8 P D 0.1782
9 L D 0.6206
10 D D -0.3318
11 Y D 0.6936
12 G D -0.7680
13 P D -0.8730
14 C D -0.6796
15 R D -1.1868
16 A D 0.4736
17 L D 2.1862
18 L D 2.1592
19 L D 1.8043
20 R D 1.0117
21 Y D -0.2126
22 Y D 0.0000
23 Y D -0.7558
24 D D 0.0000
25 R D -1.2389
26 Y D 0.0976
27 T D -0.7952
28 Q D -1.3295
29 S D -1.3582
30 C D 0.0000
31 R D -2.2322
32 Q D -1.2398
33 F D 0.0000
34 L D 1.8409
35 Y D 0.0000
36 G D 0.0000
37 G D -0.0604
38 C D -1.1195
39 E D -1.9510
40 G D -1.1843
41 N D -0.6570
42 A D -0.3456
43 N D 0.0000
44 N D 0.4396
45 F D 0.5247
46 Y D 1.3647
47 T D 0.0455
48 W D -0.9154
49 E D -2.1455
50 A D -1.1514
51 C D 0.0000
52 D D -2.5075
53 D D -2.6084
54 A D -0.9856
55 C D 0.0000
56 W D -0.3611
57 R D -0.6722
58 I D 0.9816
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Laboratory of Theory of Biopolymers 2018