| Chain sequence(s) |
D: EICLLPLDYGPCRALLLRYYYDRYTQSCRQFLYGGCEGNANNFYTWEACDDACWRI
input PDB |
| Selected Chain(s) | D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with D chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:18)
[INFO] Main: Simulation completed successfully. (00:00:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 3 | E | D | -0.9449 | |
| 4 | I | D | 0.2370 | |
| 5 | C | D | 0.0000 | |
| 6 | L | D | 0.4689 | |
| 7 | L | D | 0.2540 | |
| 8 | P | D | 0.1782 | |
| 9 | L | D | 0.6206 | |
| 10 | D | D | -0.3318 | |
| 11 | Y | D | 0.6936 | |
| 12 | G | D | -0.7680 | |
| 13 | P | D | -0.8730 | |
| 14 | C | D | -0.6796 | |
| 15 | R | D | -1.1868 | |
| 16 | A | D | 0.4736 | |
| 17 | L | D | 2.1862 | |
| 18 | L | D | 2.1592 | |
| 19 | L | D | 1.8043 | |
| 20 | R | D | 1.0117 | |
| 21 | Y | D | -0.2126 | |
| 22 | Y | D | 0.0000 | |
| 23 | Y | D | -0.7558 | |
| 24 | D | D | 0.0000 | |
| 25 | R | D | -1.2389 | |
| 26 | Y | D | 0.0976 | |
| 27 | T | D | -0.7952 | |
| 28 | Q | D | -1.3295 | |
| 29 | S | D | -1.3582 | |
| 30 | C | D | 0.0000 | |
| 31 | R | D | -2.2322 | |
| 32 | Q | D | -1.2398 | |
| 33 | F | D | 0.0000 | |
| 34 | L | D | 1.8409 | |
| 35 | Y | D | 0.0000 | |
| 36 | G | D | 0.0000 | |
| 37 | G | D | -0.0604 | |
| 38 | C | D | -1.1195 | |
| 39 | E | D | -1.9510 | |
| 40 | G | D | -1.1843 | |
| 41 | N | D | -0.6570 | |
| 42 | A | D | -0.3456 | |
| 43 | N | D | 0.0000 | |
| 44 | N | D | 0.4396 | |
| 45 | F | D | 0.5247 | |
| 46 | Y | D | 1.3647 | |
| 47 | T | D | 0.0455 | |
| 48 | W | D | -0.9154 | |
| 49 | E | D | -2.1455 | |
| 50 | A | D | -1.1514 | |
| 51 | C | D | 0.0000 | |
| 52 | D | D | -2.5075 | |
| 53 | D | D | -2.6084 | |
| 54 | A | D | -0.9856 | |
| 55 | C | D | 0.0000 | |
| 56 | W | D | -0.3611 | |
| 57 | R | D | -0.6722 | |
| 58 | I | D | 0.9816 |