| Chain sequence(s) |
A: FQFGHGFQF
C: FQFGHGFQF B: FQFGHGFQF E: FQFGHGFQF D: FQFGHGFQF G: FQFGHGFQF F: FQFGHGFQF I: FQFGHGFQF H: FQFGHGFQF K: FQFGHGFQF J: FQFGHGFQF L: FQFGHGFQF input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:45)
[INFO] Main: Simulation completed successfully. (00:02:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 2.4942 | |
| 2 | Q | A | 1.1901 | |
| 3 | F | A | 0.8381 | |
| 4 | G | A | -0.1153 | |
| 5 | H | A | 0.0000 | |
| 6 | G | A | 0.7251 | |
| 7 | F | A | 1.3141 | |
| 8 | Q | A | 1.4744 | |
| 9 | F | A | 2.7516 | |
| 1 | F | B | 2.6258 | |
| 2 | Q | B | 1.2987 | |
| 3 | F | B | 1.4790 | |
| 4 | G | B | 0.0000 | |
| 5 | H | B | 0.8693 | |
| 6 | G | B | 0.0000 | |
| 7 | F | B | 2.4431 | |
| 8 | Q | B | 1.7717 | |
| 9 | F | B | 2.2349 | |
| 1 | F | C | 3.2260 | |
| 2 | Q | C | 2.0570 | |
| 3 | F | C | 1.6972 | |
| 4 | G | C | 0.7218 | |
| 5 | H | C | 0.4215 | |
| 6 | G | C | 0.9859 | |
| 7 | F | C | 2.2447 | |
| 8 | Q | C | 1.4786 | |
| 9 | F | C | 2.3114 | |
| 1 | F | D | 1.5546 | |
| 2 | Q | D | 0.5668 | |
| 3 | F | D | 0.5527 | |
| 4 | G | D | 0.3991 | |
| 5 | H | D | 0.9913 | |
| 6 | G | D | 0.0000 | |
| 7 | F | D | 3.2716 | |
| 8 | Q | D | 2.3246 | |
| 9 | F | D | 2.6336 | |
| 1 | F | E | 2.4380 | |
| 2 | Q | E | 1.6838 | |
| 3 | F | E | 1.7366 | |
| 4 | G | E | 1.1056 | |
| 5 | H | E | 1.9972 | |
| 6 | G | E | 1.2228 | |
| 7 | F | E | 2.8389 | |
| 8 | Q | E | 0.9166 | |
| 9 | F | E | 2.1503 | |
| 1 | F | F | 2.9234 | |
| 2 | Q | F | 0.9718 | |
| 3 | F | F | 2.1654 | |
| 4 | G | F | 1.0505 | |
| 5 | H | F | 0.0000 | |
| 6 | G | F | 0.0000 | |
| 7 | F | F | 1.8418 | |
| 8 | Q | F | 1.3186 | |
| 9 | F | F | 2.6007 | |
| 1 | F | G | 3.5483 | |
| 2 | Q | G | 1.5450 | |
| 3 | F | G | 1.9070 | |
| 4 | G | G | 0.4371 | |
| 5 | H | G | 0.4604 | |
| 6 | G | G | 0.0000 | |
| 7 | F | G | 2.0396 | |
| 8 | Q | G | 1.9271 | |
| 9 | F | G | 2.7748 | |
| 1 | F | H | 2.4962 | |
| 2 | Q | H | 0.7529 | |
| 3 | F | H | 0.8278 | |
| 4 | G | H | 0.3468 | |
| 5 | H | H | 0.8127 | |
| 6 | G | H | 2.2181 | |
| 7 | F | H | 3.6256 | |
| 8 | Q | H | 2.9098 | |
| 9 | F | H | 2.9455 | |
| 1 | F | I | 2.7339 | |
| 2 | Q | I | 1.0944 | |
| 3 | F | I | 1.1437 | |
| 4 | G | I | 0.5263 | |
| 5 | H | I | 0.9552 | |
| 6 | G | I | 1.3378 | |
| 7 | F | I | 2.8632 | |
| 8 | Q | I | 2.2181 | |
| 9 | F | I | 2.8391 | |
| 1 | F | J | 3.1849 | |
| 2 | Q | J | 1.1022 | |
| 3 | F | J | 1.4117 | |
| 4 | G | J | 0.3624 | |
| 5 | H | J | 0.2604 | |
| 6 | G | J | 0.0000 | |
| 7 | F | J | 2.4155 | |
| 8 | Q | J | 1.8559 | |
| 9 | F | J | 2.9231 | |
| 1 | F | K | 2.2103 | |
| 2 | Q | K | 0.7480 | |
| 3 | F | K | 0.9007 | |
| 4 | G | K | 0.5530 | |
| 5 | H | K | 0.0000 | |
| 6 | G | K | 0.5312 | |
| 7 | F | K | 1.3817 | |
| 8 | Q | K | 0.3675 | |
| 9 | F | K | 1.8382 | |
| 1 | F | L | 2.7168 | |
| 2 | Q | L | 0.8060 | |
| 3 | F | L | 0.0000 | |
| 4 | G | L | 0.7209 | |
| 5 | H | L | 0.0000 | |
| 6 | G | L | 0.2696 | |
| 7 | F | L | 1.5627 | |
| 8 | Q | L | 0.4220 | |
| 9 | F | L | 1.9272 |