| Chain sequence(s) |
B: EELALLRAQLKGAAKALDLMLEVAKQLGLDVEKIEARTKEMKARIAEIIA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:23)
[INFO] Main: Simulation completed successfully. (00:01:24)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | B | -1.7277 | |
| 2 | E | B | -1.3303 | |
| 3 | L | B | 0.5809 | |
| 4 | A | B | 0.2444 | |
| 5 | L | B | 0.6139 | |
| 6 | L | B | 0.5023 | |
| 7 | R | B | -0.3373 | |
| 8 | A | B | -0.7507 | |
| 9 | Q | B | -1.3845 | |
| 10 | L | B | -1.3289 | |
| 11 | K | B | -2.5441 | |
| 12 | G | B | -2.1911 | |
| 13 | A | B | -1.5844 | |
| 14 | A | B | -2.0226 | |
| 15 | K | B | -2.2871 | |
| 16 | A | B | -0.9841 | |
| 17 | L | B | -1.1784 | |
| 18 | D | B | -1.4856 | |
| 19 | L | B | -0.1242 | |
| 20 | M | B | -0.1396 | |
| 21 | L | B | -1.7338 | |
| 22 | E | B | -1.7465 | |
| 23 | V | B | 0.0879 | |
| 24 | A | B | 0.0000 | |
| 25 | K | B | -2.3876 | |
| 26 | Q | B | -1.2527 | |
| 27 | L | B | 0.3237 | |
| 28 | G | B | -0.6711 | |
| 29 | L | B | -0.6076 | |
| 30 | D | B | -2.5080 | |
| 31 | V | B | -2.7198 | |
| 32 | E | B | -3.6459 | |
| 33 | K | B | -3.6510 | |
| 34 | I | B | -3.0221 | |
| 35 | E | B | -3.9565 | |
| 36 | A | B | -2.9823 | |
| 37 | R | B | -2.9752 | |
| 38 | T | B | 0.0000 | |
| 39 | K | B | -3.4514 | |
| 40 | E | B | -2.8414 | |
| 41 | M | B | -2.0535 | |
| 42 | K | B | -2.4723 | |
| 43 | A | B | -1.9579 | |
| 44 | R | B | -2.0882 | |
| 45 | I | B | 0.0000 | |
| 46 | A | B | -1.0850 | |
| 47 | E | B | -1.2695 | |
| 48 | I | B | 0.8067 | |
| 49 | I | B | 0.3298 | |
| 50 | A | B | -0.0820 |