| Chain sequence(s) |
A: MRMGGVVGSGGTLVGILEVGRELGIGAERVYGGGRQPAEEVLAAARAAGVPRAGHTGKGVAEALKATPLEEVRVVLTSDVASDPEKDFPVLEALAKAAGAELIVQPYDAETRPLVRTDPARTRRLFFDEDRAAAEALLRRVVAA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:09)
[INFO] Main: Simulation completed successfully. (00:02:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.4823 | |
| 2 | R | A | -0.9316 | |
| 3 | M | A | 0.0000 | |
| 4 | G | A | -1.0862 | |
| 5 | G | A | 0.0000 | |
| 6 | V | A | 0.0000 | |
| 7 | V | A | 0.0000 | |
| 8 | G | A | 0.0000 | |
| 9 | S | A | -0.6479 | |
| 10 | G | A | 0.0000 | |
| 11 | G | A | -0.9399 | |
| 12 | T | A | -0.3315 | |
| 13 | L | A | 0.0000 | |
| 14 | V | A | 0.0000 | |
| 15 | G | A | 0.0000 | |
| 16 | I | A | 0.0000 | |
| 17 | L | A | 0.0000 | |
| 18 | E | A | -2.3329 | |
| 19 | V | A | 0.0000 | |
| 20 | G | A | 0.0000 | |
| 21 | R | A | -3.2385 | |
| 22 | E | A | -2.7833 | |
| 23 | L | A | -1.1042 | |
| 24 | G | A | -1.3270 | |
| 25 | I | A | -1.0631 | |
| 26 | G | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -2.2232 | |
| 29 | R | A | -2.1506 | |
| 30 | V | A | 0.0000 | |
| 31 | Y | A | -0.1930 | |
| 32 | G | A | 0.0000 | |
| 33 | G | A | 0.0000 | |
| 34 | G | A | -2.0375 | |
| 35 | R | A | -2.7985 | |
| 36 | Q | A | -2.2552 | |
| 37 | P | A | -1.7570 | |
| 38 | A | A | -1.7003 | |
| 39 | E | A | -2.5084 | |
| 40 | E | A | -2.5805 | |
| 41 | V | A | 0.0000 | |
| 42 | L | A | -1.4153 | |
| 43 | A | A | -1.6131 | |
| 44 | A | A | 0.0000 | |
| 45 | A | A | 0.0000 | |
| 46 | R | A | -2.4725 | |
| 47 | A | A | -1.7054 | |
| 48 | A | A | -2.0958 | |
| 49 | G | A | -1.9130 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.9773 | |
| 52 | R | A | -2.6656 | |
| 53 | A | A | -1.4481 | |
| 54 | G | A | -0.6620 | |
| 55 | H | A | -1.0866 | |
| 56 | T | A | -1.2489 | |
| 57 | G | A | -1.9760 | |
| 58 | K | A | -2.6118 | |
| 59 | G | A | -1.8855 | |
| 60 | V | A | -1.1262 | |
| 61 | A | A | -1.2801 | |
| 62 | E | A | -2.3035 | |
| 63 | A | A | 0.0000 | |
| 64 | L | A | 0.0000 | |
| 65 | K | A | -1.9367 | |
| 66 | A | A | -1.0626 | |
| 67 | T | A | -1.1246 | |
| 68 | P | A | -1.0836 | |
| 69 | L | A | -1.4879 | |
| 70 | E | A | -2.2559 | |
| 71 | E | A | -2.0140 | |
| 72 | V | A | 0.0000 | |
| 73 | R | A | -1.7808 | |
| 74 | V | A | 0.0000 | |
| 75 | V | A | 0.0000 | |
| 76 | L | A | 0.0000 | |
| 77 | T | A | 0.0000 | |
| 78 | S | A | 0.0000 | |
| 79 | D | A | -0.2056 | |
| 80 | V | A | -0.2174 | |
| 81 | A | A | -0.8166 | |
| 82 | S | A | -0.9725 | |
| 83 | D | A | -1.8436 | |
| 84 | P | A | -1.9614 | |
| 85 | E | A | -2.9794 | |
| 86 | K | A | -2.9736 | |
| 87 | D | A | -2.1570 | |
| 88 | F | A | -1.1912 | |
| 89 | P | A | -1.0673 | |
| 90 | V | A | -0.8321 | |
| 91 | L | A | 0.0000 | |
| 92 | E | A | -1.0311 | |
| 93 | A | A | -0.6752 | |
| 94 | L | A | -0.8305 | |
| 95 | A | A | 0.0000 | |
| 96 | K | A | -1.9903 | |
| 97 | A | A | -1.1384 | |
| 98 | A | A | 0.0000 | |
| 99 | G | A | -1.7701 | |
| 100 | A | A | -1.8575 | |
| 101 | E | A | -1.6415 | |
| 102 | L | A | -0.4431 | |
| 103 | I | A | 0.0000 | |
| 104 | V | A | 0.9254 | |
| 105 | Q | A | 0.0580 | |
| 106 | P | A | -0.5537 | |
| 107 | Y | A | -1.2532 | |
| 108 | D | A | -2.5450 | |
| 109 | A | A | -1.9656 | |
| 110 | E | A | -2.5555 | |
| 111 | T | A | -2.0210 | |
| 112 | R | A | -2.0587 | |
| 113 | P | A | -1.5785 | |
| 114 | L | A | -1.4973 | |
| 115 | V | A | -1.5545 | |
| 116 | R | A | -2.4802 | |
| 117 | T | A | -1.8370 | |
| 118 | D | A | -1.9904 | |
| 119 | P | A | -2.1238 | |
| 120 | A | A | -1.6576 | |
| 121 | R | A | -2.5679 | |
| 122 | T | A | -2.1924 | |
| 123 | R | A | -2.6343 | |
| 124 | R | A | -3.7202 | |
| 125 | L | A | -2.3908 | |
| 126 | F | A | -2.0905 | |
| 127 | F | A | 0.0000 | |
| 128 | D | A | -4.1826 | |
| 129 | E | A | -3.9077 | |
| 130 | D | A | -3.3009 | |
| 131 | R | A | -2.9506 | |
| 132 | A | A | -1.4753 | |
| 133 | A | A | -1.2001 | |
| 134 | A | A | 0.0000 | |
| 135 | E | A | -1.7565 | |
| 136 | A | A | -1.5018 | |
| 137 | L | A | 0.0000 | |
| 138 | L | A | 0.0000 | |
| 139 | R | A | -2.7835 | |
| 140 | R | A | -2.8722 | |
| 141 | V | A | 0.0000 | |
| 142 | V | A | -1.1279 | |
| 143 | A | A | -1.3429 | |
| 144 | A | A | -1.1183 |