| Chain sequence(s) |
A: SCSPLPSSYTLTSNPKLRDLFTHFNGTKVTTKAAFACRQAELSELIQRYELGTLPGRPSTLTASFSGNTLTINCGENGKSISFTVTITYPSSGTAPYPAIIGFGGGSIPQPDGVANINFNNDDIAKQTDISSRGQGKFYDLYGSSHSAGAMTAWAWGVSRVIDALELTPAAKIDTTKIGVTGCSRNGKGALVAGAFEKRIVLTLPQESGMGGSACWRISDYLKSQGKNIQTASEIVGEAPWFSTTFNSYVNKVELLPFDHHSLAALIAPRGLFVIDNDIDWLGPESCTGCMYAARRAWQALGVPDNMGYSQIGSHAHCAFPSSQQANLTAFVNKFLLGQSTNTAIFQSDFSPNPSQWIDWTTPTLS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:16)
[INFO] Main: Simulation completed successfully. (00:05:21)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -0.1173 | |
| 2 | C | A | 0.1115 | |
| 3 | S | A | -0.3384 | |
| 4 | P | A | -0.4183 | |
| 5 | L | A | -0.3719 | |
| 6 | P | A | -0.3567 | |
| 7 | S | A | -0.3019 | |
| 8 | S | A | -0.1725 | |
| 9 | Y | A | 0.0752 | |
| 10 | T | A | 0.1506 | |
| 11 | L | A | 0.2010 | |
| 12 | T | A | -0.0711 | |
| 13 | S | A | -0.7425 | |
| 14 | N | A | -0.8802 | |
| 15 | P | A | -1.0967 | |
| 16 | K | A | -1.5644 | |
| 17 | L | A | 0.0000 | |
| 18 | R | A | -0.9199 | |
| 19 | D | A | -0.9097 | |
| 20 | L | A | 0.0000 | |
| 21 | F | A | 0.0000 | |
| 22 | T | A | -1.1452 | |
| 23 | H | A | -1.0252 | |
| 24 | F | A | -0.5677 | |
| 25 | N | A | -1.5250 | |
| 26 | G | A | -1.4283 | |
| 27 | T | A | -1.4595 | |
| 28 | K | A | -2.0552 | |
| 29 | V | A | 0.0000 | |
| 30 | T | A | -0.8702 | |
| 31 | T | A | -0.9333 | |
| 32 | K | A | -1.3406 | |
| 33 | A | A | -0.5486 | |
| 34 | A | A | -0.6110 | |
| 35 | F | A | 0.0000 | |
| 36 | A | A | -0.2468 | |
| 37 | C | A | -0.1269 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -0.3569 | |
| 40 | A | A | -0.4106 | |
| 41 | E | A | -0.5707 | |
| 42 | L | A | 0.0000 | |
| 43 | S | A | -1.0525 | |
| 44 | E | A | -1.9559 | |
| 45 | L | A | 0.0000 | |
| 46 | I | A | 0.0000 | |
| 47 | Q | A | -1.4842 | |
| 48 | R | A | -2.2198 | |
| 49 | Y | A | -1.1726 | |
| 50 | E | A | 0.0000 | |
| 51 | L | A | 0.0000 | |
| 52 | G | A | 0.0000 | |
| 53 | T | A | -0.7056 | |
| 54 | L | A | -0.4508 | |
| 55 | P | A | -0.5295 | |
| 56 | G | A | -1.3354 | |
| 57 | R | A | -2.1547 | |
| 58 | P | A | 0.0000 | |
| 59 | S | A | -1.0704 | |
| 60 | T | A | -0.7733 | |
| 61 | L | A | -0.3153 | |
| 62 | T | A | 0.0564 | |
| 63 | A | A | -0.0344 | |
| 64 | S | A | 0.0411 | |
| 65 | F | A | -0.1712 | |
| 66 | S | A | -0.5766 | |
| 67 | G | A | -0.9432 | |
| 68 | N | A | -1.1230 | |
| 69 | T | A | -0.7314 | |
| 70 | L | A | 0.0000 | |
| 71 | T | A | -0.1971 | |
| 72 | I | A | 0.0000 | |
| 73 | N | A | -0.5667 | |
| 74 | C | A | 0.0000 | |
| 75 | G | A | -1.5151 | |
| 76 | E | A | -1.8992 | |
| 77 | N | A | -2.1887 | |
| 78 | G | A | -2.0416 | |
| 79 | K | A | -2.7686 | |
| 80 | S | A | -1.8392 | |
| 81 | I | A | 0.0000 | |
| 82 | S | A | -0.4411 | |
| 83 | F | A | 0.0000 | |
| 84 | T | A | -0.5383 | |
| 85 | V | A | 0.0000 | |
| 86 | T | A | -0.8605 | |
| 87 | I | A | 0.0000 | |
| 88 | T | A | -0.4678 | |
| 89 | Y | A | -0.4060 | |
| 90 | P | A | -0.7436 | |
| 91 | S | A | -0.6628 | |
| 92 | S | A | -0.8766 | |
| 93 | G | A | -0.8441 | |
| 94 | T | A | -0.4834 | |
| 95 | A | A | -0.5162 | |
| 96 | P | A | -0.8250 | |
| 97 | Y | A | -0.4445 | |
| 98 | P | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | I | A | 0.0000 | |
| 101 | I | A | 0.0000 | |
| 102 | G | A | 0.0000 | |
| 103 | F | A | 0.0000 | |
| 104 | G | A | -1.4642 | |
| 105 | G | A | -1.1237 | |
| 106 | G | A | -0.6476 | |
| 107 | S | A | -0.2337 | |
| 108 | I | A | -0.0765 | |
| 109 | P | A | -0.7131 | |
| 110 | Q | A | -1.3511 | |
| 111 | P | A | -1.4381 | |
| 112 | D | A | -2.1315 | |
| 113 | G | A | 0.0000 | |
| 114 | V | A | 0.0000 | |
| 115 | A | A | 0.0000 | |
| 116 | N | A | -0.5915 | |
| 117 | I | A | 0.0000 | |
| 118 | N | A | -1.4789 | |
| 119 | F | A | 0.0000 | |
| 120 | N | A | -2.2212 | |
| 121 | N | A | 0.0000 | |
| 122 | D | A | -2.4971 | |
| 123 | D | A | -2.0402 | |
| 124 | I | A | 0.0000 | |
| 125 | A | A | 0.0000 | |
| 126 | K | A | -2.0467 | |
| 127 | Q | A | 0.0000 | |
| 128 | T | A | -0.9163 | |
| 129 | D | A | -0.9638 | |
| 130 | I | A | 0.1600 | |
| 131 | S | A | -0.4412 | |
| 132 | S | A | 0.0000 | |
| 133 | R | A | -0.9413 | |
| 134 | G | A | 0.0000 | |
| 135 | Q | A | -1.9915 | |
| 136 | G | A | -1.9153 | |
| 137 | K | A | -1.7451 | |
| 138 | F | A | 0.0000 | |
| 139 | Y | A | 0.0000 | |
| 140 | D | A | -2.4561 | |
| 141 | L | A | 0.0000 | |
| 142 | Y | A | -1.0826 | |
| 143 | G | A | -1.1797 | |
| 144 | S | A | -1.1599 | |
| 145 | S | A | -0.6369 | |
| 146 | H | A | -0.4885 | |
| 147 | S | A | -0.5541 | |
| 148 | A | A | 0.0000 | |
| 149 | G | A | 0.0000 | |
| 150 | A | A | 0.0000 | |
| 151 | M | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | A | A | 0.0000 | |
| 154 | W | A | 0.0000 | |
| 155 | A | A | 0.0000 | |
| 156 | W | A | 0.0000 | |
| 157 | G | A | 0.0000 | |
| 158 | V | A | 0.0000 | |
| 159 | S | A | -0.7497 | |
| 160 | R | A | 0.0000 | |
| 161 | V | A | 0.0000 | |
| 162 | I | A | 0.0000 | |
| 163 | D | A | -0.7811 | |
| 164 | A | A | 0.0000 | |
| 165 | L | A | 0.0000 | |
| 166 | E | A | -1.2475 | |
| 167 | L | A | 0.5422 | |
| 168 | T | A | 0.0000 | |
| 169 | P | A | -0.6171 | |
| 170 | A | A | -0.3708 | |
| 171 | A | A | 0.0000 | |
| 172 | K | A | -1.0698 | |
| 173 | I | A | 0.0000 | |
| 174 | D | A | -0.9985 | |
| 175 | T | A | -1.0732 | |
| 176 | T | A | -0.7091 | |
| 177 | K | A | -0.6744 | |
| 178 | I | A | 0.0000 | |
| 179 | G | A | 0.0000 | |
| 180 | V | A | 0.0000 | |
| 181 | T | A | 0.0000 | |
| 182 | G | A | 0.0000 | |
| 183 | C | A | 0.0000 | |
| 184 | S | A | -1.0263 | |
| 185 | R | A | -1.8369 | |
| 186 | N | A | -1.3176 | |
| 187 | G | A | 0.0000 | |
| 188 | K | A | 0.0000 | |
| 189 | G | A | 0.0000 | |
| 190 | A | A | 0.0000 | |
| 191 | L | A | 0.0000 | |
| 192 | V | A | 0.0000 | |
| 193 | A | A | 0.0000 | |
| 194 | G | A | 0.0000 | |
| 195 | A | A | 0.0000 | |
| 196 | F | A | 0.0000 | |
| 197 | E | A | 0.0000 | |
| 198 | K | A | -1.9545 | |
| 199 | R | A | -1.4815 | |
| 200 | I | A | 0.0000 | |
| 201 | V | A | -0.3399 | |
| 202 | L | A | 0.0000 | |
| 203 | T | A | 0.0000 | |
| 204 | L | A | 0.0000 | |
| 205 | P | A | 0.0000 | |
| 206 | Q | A | 0.0000 | |
| 207 | E | A | 0.0000 | |
| 208 | S | A | 0.0000 | |
| 209 | G | A | 0.0000 | |
| 210 | M | A | 0.0000 | |
| 211 | G | A | 0.0000 | |
| 212 | G | A | 0.0000 | |
| 213 | S | A | 0.0000 | |
| 214 | A | A | 0.0000 | |
| 215 | C | A | 0.0000 | |
| 216 | W | A | 0.0000 | |
| 217 | R | A | 0.0000 | |
| 218 | I | A | 0.0000 | |
| 219 | S | A | 0.0000 | |
| 220 | D | A | -2.1643 | |
| 221 | Y | A | -0.8616 | |
| 222 | L | A | -1.2994 | |
| 223 | K | A | -1.9599 | |
| 224 | S | A | -1.5896 | |
| 225 | Q | A | -1.9733 | |
| 226 | G | A | -1.6319 | |
| 227 | K | A | -1.9145 | |
| 228 | N | A | -1.9136 | |
| 229 | I | A | 0.0000 | |
| 230 | Q | A | 0.0000 | |
| 231 | T | A | 0.0000 | |
| 232 | A | A | 0.0000 | |
| 233 | S | A | -1.4828 | |
| 234 | E | A | -1.1700 | |
| 235 | I | A | 0.0000 | |
| 236 | V | A | -0.6970 | |
| 237 | G | A | -1.0073 | |
| 238 | E | A | -1.1065 | |
| 239 | A | A | 0.0000 | |
| 240 | P | A | 0.0000 | |
| 241 | W | A | 0.0000 | |
| 242 | F | A | 0.0000 | |
| 243 | S | A | 0.0000 | |
| 244 | T | A | -0.6048 | |
| 245 | T | A | -0.8250 | |
| 246 | F | A | 0.0000 | |
| 247 | N | A | -1.7353 | |
| 248 | S | A | -1.2436 | |
| 249 | Y | A | -1.2615 | |
| 250 | V | A | 0.0000 | |
| 251 | N | A | -2.5559 | |
| 252 | K | A | -2.5848 | |
| 253 | V | A | 0.0000 | |
| 254 | E | A | -1.4764 | |
| 255 | L | A | -0.5566 | |
| 256 | L | A | 0.0000 | |
| 257 | P | A | 0.0000 | |
| 258 | F | A | 0.0000 | |
| 259 | D | A | 0.0000 | |
| 260 | H | A | 0.0000 | |
| 261 | H | A | 0.0000 | |
| 262 | S | A | 0.0000 | |
| 263 | L | A | 0.0000 | |
| 264 | A | A | 0.0000 | |
| 265 | A | A | 0.0000 | |
| 266 | L | A | 0.0000 | |
| 267 | I | A | 0.0000 | |
| 268 | A | A | 0.0000 | |
| 269 | P | A | -0.3990 | |
| 270 | R | A | -0.4966 | |
| 271 | G | A | 0.0000 | |
| 272 | L | A | 0.0000 | |
| 273 | F | A | 0.0000 | |
| 274 | V | A | 0.0000 | |
| 275 | I | A | 0.0000 | |
| 276 | D | A | 0.0000 | |
| 277 | N | A | 0.0000 | |
| 278 | D | A | -1.6754 | |
| 279 | I | A | -0.8244 | |
| 280 | D | A | -1.4231 | |
| 281 | W | A | -0.5092 | |
| 282 | L | A | 0.0000 | |
| 283 | G | A | 0.0000 | |
| 284 | P | A | 0.0000 | |
| 285 | E | A | -0.9591 | |
| 286 | S | A | 0.0000 | |
| 287 | C | A | 0.0000 | |
| 288 | T | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | C | A | 0.0000 | |
| 291 | M | A | 0.0000 | |
| 292 | Y | A | 0.1311 | |
| 293 | A | A | 0.0000 | |
| 294 | A | A | 0.0000 | |
| 295 | R | A | -0.4021 | |
| 296 | R | A | -0.6078 | |
| 297 | A | A | 0.0000 | |
| 298 | W | A | 0.0000 | |
| 299 | Q | A | -0.9194 | |
| 300 | A | A | 0.0000 | |
| 301 | L | A | 0.0000 | |
| 302 | G | A | -0.7712 | |
| 303 | V | A | -0.3013 | |
| 304 | P | A | -0.6376 | |
| 305 | D | A | -0.8206 | |
| 306 | N | A | -0.6719 | |
| 307 | M | A | 0.0000 | |
| 308 | G | A | 0.0000 | |
| 309 | Y | A | 0.0000 | |
| 310 | S | A | 0.0000 | |
| 311 | Q | A | 0.0000 | |
| 312 | I | A | -0.4475 | |
| 313 | G | A | -0.8358 | |
| 314 | S | A | -0.5143 | |
| 315 | H | A | -0.4200 | |
| 316 | A | A | -0.3478 | |
| 317 | H | A | -0.5895 | |
| 318 | C | A | -0.0586 | |
| 319 | A | A | 0.0326 | |
| 320 | F | A | 0.1557 | |
| 321 | P | A | -0.1197 | |
| 322 | S | A | -0.4711 | |
| 323 | S | A | -0.3877 | |
| 324 | Q | A | 0.0000 | |
| 325 | Q | A | -0.6443 | |
| 326 | A | A | -0.3661 | |
| 327 | N | A | -0.4898 | |
| 328 | L | A | 0.0000 | |
| 329 | T | A | -0.5868 | |
| 330 | A | A | -0.6437 | |
| 331 | F | A | 0.0000 | |
| 332 | V | A | 0.0000 | |
| 333 | N | A | -0.9537 | |
| 334 | K | A | -0.9595 | |
| 335 | F | A | -0.2766 | |
| 336 | L | A | 0.0000 | |
| 337 | L | A | -0.4508 | |
| 338 | G | A | -0.8650 | |
| 339 | Q | A | -1.3010 | |
| 340 | S | A | -1.0471 | |
| 341 | T | A | -1.2217 | |
| 342 | N | A | -1.5764 | |
| 343 | T | A | 0.0000 | |
| 344 | A | A | -0.4145 | |
| 345 | I | A | 0.0102 | |
| 346 | F | A | 0.3746 | |
| 347 | Q | A | -0.4823 | |
| 348 | S | A | -1.1060 | |
| 349 | D | A | -1.9624 | |
| 350 | F | A | -1.0220 | |
| 351 | S | A | -0.8065 | |
| 352 | P | A | -0.7341 | |
| 353 | N | A | -1.0692 | |
| 354 | P | A | -0.9930 | |
| 355 | S | A | -1.1103 | |
| 356 | Q | A | -1.2614 | |
| 357 | W | A | 0.0000 | |
| 358 | I | A | -1.1864 | |
| 359 | D | A | -1.9882 | |
| 360 | W | A | -0.9270 | |
| 361 | T | A | -0.4645 | |
| 362 | T | A | -0.3159 | |
| 363 | P | A | -0.5043 | |
| 364 | T | A | -0.5241 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6520 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine