| Chain sequence(s) |
A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFNIAYWEPGIGGEAIWLRVPGSERSYDLTGLKPGTEYKVWIHGVKGGAASPPLIARFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:16)
[INFO] Main: Simulation completed successfully. (00:02:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.1128 | |
| 2 | L | A | 0.5000 | |
| 3 | P | A | -0.1577 | |
| 4 | A | A | -0.4428 | |
| 5 | P | A | 0.0000 | |
| 6 | K | A | -2.0259 | |
| 7 | N | A | -1.1996 | |
| 8 | L | A | 0.2175 | |
| 9 | V | A | 0.9431 | |
| 10 | V | A | 0.0588 | |
| 11 | S | A | -0.5936 | |
| 12 | R | A | -1.9937 | |
| 13 | V | A | -0.9860 | |
| 14 | T | A | -1.7497 | |
| 15 | E | A | -2.9831 | |
| 16 | D | A | -2.6368 | |
| 17 | S | A | -2.0154 | |
| 18 | A | A | 0.0000 | |
| 19 | R | A | -1.1711 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.3743 | |
| 22 | W | A | 0.0000 | |
| 23 | T | A | -1.2996 | |
| 24 | A | A | -1.4286 | |
| 25 | P | A | -1.4092 | |
| 26 | D | A | -2.2901 | |
| 27 | A | A | -1.4398 | |
| 28 | A | A | -1.1815 | |
| 29 | F | A | 0.0000 | |
| 30 | D | A | -2.4574 | |
| 31 | S | A | 0.0000 | |
| 32 | F | A | 0.0000 | |
| 33 | N | A | -0.5685 | |
| 34 | I | A | 0.0000 | |
| 35 | A | A | 0.0000 | |
| 36 | Y | A | 0.4696 | |
| 37 | W | A | -0.2502 | |
| 38 | E | A | -1.0212 | |
| 39 | P | A | -0.7691 | |
| 40 | G | A | 0.0870 | |
| 41 | I | A | 1.2280 | |
| 42 | G | A | -0.1486 | |
| 43 | G | A | -0.4613 | |
| 44 | E | A | -1.2934 | |
| 45 | A | A | -0.1057 | |
| 46 | I | A | 1.0922 | |
| 47 | W | A | 1.1536 | |
| 48 | L | A | 0.1511 | |
| 49 | R | A | -1.5748 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.5569 | |
| 52 | G | A | 0.0000 | |
| 53 | S | A | -1.6613 | |
| 54 | E | A | -1.6055 | |
| 55 | R | A | -1.2156 | |
| 56 | S | A | -0.6800 | |
| 57 | Y | A | -0.7391 | |
| 58 | D | A | -1.6325 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -1.3973 | |
| 61 | G | A | -1.4609 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -3.0205 | |
| 64 | P | A | -2.5669 | |
| 65 | G | A | -1.9289 | |
| 66 | T | A | -2.0765 | |
| 67 | E | A | -2.6670 | |
| 68 | Y | A | 0.0000 | |
| 69 | K | A | -1.0402 | |
| 70 | V | A | 0.0000 | |
| 71 | W | A | 0.8788 | |
| 72 | I | A | 0.0000 | |
| 73 | H | A | -0.2841 | |
| 74 | G | A | 0.0000 | |
| 75 | V | A | -1.1903 | |
| 76 | K | A | -1.6990 | |
| 77 | G | A | -1.4001 | |
| 78 | G | A | -1.1047 | |
| 79 | A | A | -0.5095 | |
| 80 | A | A | -0.1251 | |
| 81 | S | A | 0.0000 | |
| 82 | P | A | 0.2815 | |
| 83 | P | A | 0.2110 | |
| 84 | L | A | 0.5254 | |
| 85 | I | A | 1.2415 | |
| 86 | A | A | 0.0976 | |
| 87 | R | A | -1.7673 | |
| 88 | F | A | 0.0000 | |
| 89 | T | A | -1.8243 | |
| 90 | T | A | -1.9833 |