| Chain sequence(s) |
A: GKITLYEDRGFQGRYECSSDPNLQPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRRGDYADQQWMGLSDSVRSCRLIPSGSRIRLYEREDYRGQMIEFTEDCSCLQDRFRFNEISLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGLRRVIDFS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:34)
[INFO] Main: Simulation completed successfully. (00:01:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.2874 | |
| 2 | K | A | -2.0793 | |
| 3 | I | A | 0.0000 | |
| 4 | T | A | -1.5279 | |
| 5 | L | A | 0.0000 | |
| 6 | Y | A | -1.5275 | |
| 7 | E | A | 0.0000 | |
| 8 | D | A | -2.6892 | |
| 9 | R | A | -2.9251 | |
| 10 | G | A | -1.6950 | |
| 11 | F | A | -1.6038 | |
| 12 | Q | A | -2.5170 | |
| 13 | G | A | -2.3654 | |
| 14 | R | A | -2.1624 | |
| 16 | Y | A | -0.3793 | |
| 17 | E | A | -1.6105 | |
| 18 | C | A | -1.4151 | |
| 19 | S | A | -1.4046 | |
| 20 | S | A | -1.5617 | |
| 21 | D | A | -2.1670 | |
| 23 | P | A | -2.0646 | |
| 24 | N | A | -2.2615 | |
| 25 | L | A | 0.0000 | |
| 26 | Q | A | -1.7584 | |
| 27 | P | A | -0.7296 | |
| 28 | Y | A | -0.2180 | |
| 29 | L | A | 0.0000 | |
| 30 | S | A | -1.2197 | |
| 31 | R | A | -1.8525 | |
| 32 | C | A | 0.0000 | |
| 33 | N | A | -2.0505 | |
| 34 | S | A | 0.0000 | |
| 35 | A | A | 0.0000 | |
| 36 | R | A | -2.6281 | |
| 37 | V | A | 0.0000 | |
| 38 | D | A | -2.9533 | |
| 39 | S | A | -1.5330 | |
| 40 | G | A | -0.6726 | |
| 41 | C | A | 0.0000 | |
| 42 | W | A | 0.0000 | |
| 43 | M | A | 0.0000 | |
| 44 | L | A | 0.0000 | |
| 45 | Y | A | 0.0000 | |
| 46 | E | A | -1.1592 | |
| 47 | Q | A | -1.5833 | |
| 48 | P | A | -1.8771 | |
| 49 | N | A | -1.9600 | |
| 50 | Y | A | -1.3322 | |
| 51 | S | A | -0.9812 | |
| 52 | G | A | -0.9234 | |
| 53 | L | A | -0.2033 | |
| 54 | Q | A | -0.2079 | |
| 55 | Y | A | 0.0000 | |
| 56 | F | A | 0.0000 | |
| 57 | L | A | 0.0000 | |
| 58 | R | A | -1.0761 | |
| 59 | R | A | -1.8007 | |
| 60 | G | A | -2.2517 | |
| 61 | D | A | -2.9138 | |
| 62 | Y | A | -2.0536 | |
| 63 | A | A | -2.0056 | |
| 64 | D | A | -2.3343 | |
| 66 | Q | A | -1.7754 | |
| 67 | Q | A | -2.0143 | |
| 68 | W | A | 0.0000 | |
| 69 | M | A | -0.4891 | |
| 70 | G | A | -0.4404 | |
| 71 | L | A | 0.7087 | |
| 72 | S | A | -0.5537 | |
| 73 | D | A | -1.8145 | |
| 74 | S | A | 0.0000 | |
| 75 | V | A | 0.0000 | |
| 76 | R | A | -1.9958 | |
| 77 | S | A | 0.0000 | |
| 78 | C | A | 0.0000 | |
| 79 | R | A | -1.2341 | |
| 80 | L | A | -0.5534 | |
| 81 | I | A | -0.0289 | |
| 82 | P | A | -0.1875 | |
| 84 | S | A | -0.7773 | |
| 85 | G | A | -0.7882 | |
| 86 | S | A | -1.1843 | |
| 88 | R | A | -2.3490 | |
| 89 | I | A | 0.0000 | |
| 90 | R | A | -1.3633 | |
| 91 | L | A | 0.0000 | |
| 92 | Y | A | 0.0000 | |
| 93 | E | A | -2.6475 | |
| 94 | R | A | -3.7357 | |
| 95 | E | A | -4.2514 | |
| 96 | D | A | -4.1249 | |
| 97 | Y | A | -3.1195 | |
| 98 | R | A | -3.6727 | |
| 99 | G | A | -2.6232 | |
| 100 | Q | A | -1.7273 | |
| 101 | M | A | -0.8774 | |
| 102 | I | A | -0.6691 | |
| 103 | E | A | -1.7389 | |
| 104 | F | A | 0.0000 | |
| 105 | T | A | -2.2353 | |
| 106 | E | A | -2.9414 | |
| 107 | D | A | -2.3864 | |
| 108 | C | A | 0.0000 | |
| 109 | S | A | -1.3538 | |
| 110 | C | A | -1.4598 | |
| 111 | L | A | 0.0000 | |
| 112 | Q | A | -2.6407 | |
| 113 | D | A | -3.2926 | |
| 114 | R | A | -3.1271 | |
| 115 | F | A | 0.0000 | |
| 116 | R | A | -3.0631 | |
| 117 | F | A | -2.1668 | |
| 118 | N | A | -1.8635 | |
| 119 | E | A | -2.3263 | |
| 120 | I | A | 0.0000 | |
| 122 | S | A | 0.0000 | |
| 123 | L | A | 0.0000 | |
| 124 | N | A | -1.6417 | |
| 125 | V | A | 0.0000 | |
| 126 | L | A | -0.7482 | |
| 127 | E | A | -1.7046 | |
| 128 | G | A | -1.1298 | |
| 129 | S | A | 0.0000 | |
| 130 | W | A | 0.0000 | |
| 131 | V | A | 0.0000 | |
| 132 | L | A | 0.0000 | |
| 133 | Y | A | 0.0000 | |
| 134 | E | A | -1.2698 | |
| 135 | L | A | -0.2262 | |
| 136 | S | A | -0.5945 | |
| 137 | N | A | -1.0835 | |
| 138 | Y | A | -0.6337 | |
| 139 | R | A | -1.0236 | |
| 140 | G | A | -0.4973 | |
| 141 | R | A | -0.6658 | |
| 142 | Q | A | 0.0000 | |
| 143 | Y | A | -0.0827 | |
| 144 | L | A | 0.1686 | |
| 145 | L | A | 0.0000 | |
| 146 | M | A | 0.0102 | |
| 147 | P | A | -0.7767 | |
| 148 | G | A | -1.1218 | |
| 149 | D | A | -2.4259 | |
| 150 | Y | A | -2.2813 | |
| 151 | R | A | -3.5553 | |
| 152 | R | A | -3.3611 | |
| 153 | Y | A | -2.0854 | |
| 154 | Q | A | -1.9883 | |
| 155 | D | A | -1.9636 | |
| 156 | W | A | 0.0000 | |
| 157 | G | A | -1.2248 | |
| 158 | A | A | 0.0000 | |
| 159 | T | A | -0.7530 | |
| 160 | N | A | -1.4516 | |
| 161 | A | A | -2.0198 | |
| 162 | R | A | -2.0403 | |
| 163 | V | A | 0.0000 | |
| 164 | G | A | 0.0000 | |
| 166 | L | A | 0.0000 | |
| 167 | R | A | -1.4014 | |
| 168 | R | A | -1.5822 | |
| 169 | V | A | 0.0000 | |
| 170 | I | A | 0.3011 | |
| 171 | D | A | 0.2414 | |
| 172 | F | A | 1.3617 | |
| 173 | S | A | 0.5787 |