Project name: query_structure

Status: done

Started: 2026-03-17 01:30:11
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Chain sequence(s) A: VSSVPTKLEVVAATPTSLLISWDAWSSWYYYISYYRITYGETGGNSPVQEFTVPGSSYTATISGLSPGVDYTITVYAWYYDQYYYLVESSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:31)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:32)
Show buried residues

Minimal score value
-2.6239
Maximal score value
2.592
Average score
-0.06
Total score value
-5.8795

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.6978
2 S A 0.6458
3 S A 0.3077
4 V A -0.0708
5 P A 0.0000
6 T A -1.5287
7 K A -2.6239
8 L A 0.0000
9 E A -1.8782
10 V A 0.0942
11 V A 1.5267
12 A A 0.8868
13 A A 0.2897
14 T A -0.1976
15 P A -0.8094
16 T A -0.5322
17 S A -0.3179
18 L A 0.0000
19 L A 0.7420
20 I A 0.0000
21 S A -0.4495
22 W A 0.0000
23 D A -2.2069
24 A A -0.7321
25 W A 0.1757
26 S A 0.5718
27 S A 1.3674
28 W A 2.1302
29 Y A 2.1422
30 Y A 2.0660
31 Y A 2.3656
32 I A 1.2258
33 S A 0.7443
34 Y A 0.3653
35 Y A 0.0000
36 R A -0.7718
37 I A 0.0000
38 T A -0.6793
39 Y A -0.4353
40 G A 0.0000
41 E A -1.3612
42 T A -1.2237
43 G A -1.2268
44 G A -1.4016
45 N A -1.5430
46 S A -0.9055
47 P A -0.4200
48 V A 0.2569
49 Q A -1.2067
50 E A -1.8400
51 F A -0.7985
52 T A -0.3623
53 V A 0.0000
54 P A -0.1353
55 G A 0.3027
56 S A 0.1350
57 S A 0.1470
58 Y A 0.5387
59 T A 0.3022
60 A A 0.0000
61 T A 0.2850
62 I A 0.0000
63 S A -0.4749
64 G A -0.6881
65 L A 0.0000
66 S A -0.8364
67 P A -0.9821
68 G A -1.0684
69 V A -0.8765
70 D A -1.7938
71 Y A 0.0000
72 T A -0.7292
73 I A 0.0000
74 T A -0.1973
75 V A 0.0000
76 Y A -0.1023
77 A A 0.0000
78 W A 0.5738
79 Y A 1.4465
80 Y A 2.0845
81 D A 1.2781
82 Q A 0.4013
83 Y A 1.7767
84 Y A 2.5920
85 Y A 2.4047
86 L A 1.5666
87 V A 0.7991
88 E A -0.2666
89 S A 0.0000
90 S A -0.2456
91 P A -0.2237
92 I A -0.0421
93 S A -0.5578
94 I A -0.6981
95 N A -1.7047
96 Y A -1.4569
97 R A -2.3296
98 T A -1.1830
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Laboratory of Theory of Biopolymers 2018