Project name: 1348

Status: done

Started: 2025-06-25 14:10:25
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Chain sequence(s) H: EVQLLESGGGSVQPGGSLRLSCAASGVTYSHYWLAWFRQAPGKEREGVAAIYTNDGTTYYGDSVKGRFTISLDNSKNTLYLQMSSLTAEDTAVYYCALRGNDGSWFSPLLPYHYNYWGQGTQVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:41)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:41)
Show buried residues

Minimal score value
-2.9609
Maximal score value
2.3351
Average score
-0.6864
Total score value
-87.1697

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.0968
2 V H 0.0000
3 Q H -1.3062
4 L H 0.0000
5 L H 0.9285
6 E H 0.1803
7 S H -0.2900
8 G H -0.8439
9 G H -0.8636
11 G H -0.6816
12 S H -0.6667
13 V H -0.7527
14 Q H -1.5514
15 P H -1.3633
16 G H -1.0626
17 G H -0.9063
18 S H -0.9932
19 L H -1.0018
20 R H -1.6216
21 L H 0.0000
22 S H 0.0000
23 C H 0.0000
24 A H -0.1262
25 A H -0.5151
26 S H -0.7372
27 G H -0.9043
28 V H -0.5894
29 T H -0.1255
30 Y H -0.2770
35 S H -1.0081
36 H H -1.9678
37 Y H 0.0000
38 W H 0.0000
39 L H 0.0000
40 A H 0.0000
41 W H 0.0000
42 F H 0.0000
43 R H 0.0000
44 Q H -1.5127
45 A H -1.4701
46 P H -1.1620
47 G H -1.5505
48 K H -2.5854
49 E H -2.9609
50 R H -1.7389
51 E H -1.2785
52 G H -0.5905
53 V H 0.0000
54 A H 0.0000
55 A H 0.0000
56 I H 0.0000
57 Y H -0.5229
58 T H -1.2049
59 N H -1.9762
62 D H -2.3859
63 G H -1.4461
64 T H -0.5466
65 T H -0.1504
66 Y H 0.1107
67 Y H -0.7530
68 G H -1.2027
69 D H -2.3951
70 S H -1.7895
71 V H 0.0000
72 K H -2.5406
74 G H -1.6887
75 R H -1.3565
76 F H 0.0000
77 T H -0.8901
78 I H 0.0000
79 S H -0.3112
80 L H -0.5940
81 D H -1.5458
82 N H -2.3370
83 S H -1.8517
84 K H -2.5434
85 N H -1.9045
86 T H -0.9817
87 L H 0.0000
88 Y H -0.2674
89 L H 0.0000
90 Q H -1.4647
91 M H 0.0000
92 S H -0.9253
93 S H -0.8022
94 L H 0.0000
95 T H -1.1291
96 A H -1.1609
97 E H -1.8676
98 D H 0.0000
99 T H -0.7242
100 A H 0.0000
101 V H -0.2323
102 Y H 0.0000
103 Y H -0.0711
104 C H 0.0000
105 A H 0.0000
106 L H 0.0000
107 R H -1.4785
108 G H -1.9222
109 N H -2.8808
110 D H -2.8271
111 G H -1.2604
111A S H -0.0514
111B W H 1.4733
111C F H 2.3351
112D S H 1.3966
112C P H 0.0000
112B L H 0.9594
112A L H 0.8412
112 P H 0.2410
113 Y H 0.9976
114 H H -0.1564
115 Y H 0.0000
116 N H -1.2639
117 Y H -0.7621
118 W H -0.0874
119 G H -0.1410
120 Q H -0.8945
121 G H -0.4107
122 T H -0.5011
123 Q H -0.8295
124 V H 0.0000
125 T H -0.7297
126 V H 0.0000
127 S H -0.9803
128 S H -0.7913
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Laboratory of Theory of Biopolymers 2018