Project name: query_structure

Status: done

Started: 2026-03-16 23:38:32
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Chain sequence(s) A: GSSVSSVPTKLEVVAATPTSLLISWDAYYYSSWGVGYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYWGDYWPVHSPISINYRTC
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:37)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:38)
Show buried residues

Minimal score value
-2.1478
Maximal score value
2.1357
Average score
-0.1562
Total score value
-15.4647

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.6053
2 S A -0.5213
3 S A -0.0074
4 V A 0.7162
5 S A 0.1232
6 S A -0.1489
7 V A -0.1257
8 P A 0.0000
9 T A -0.6972
10 K A -1.4432
11 L A 0.0000
12 E A -0.9797
13 V A 0.3515
14 V A 1.6634
15 A A 0.9516
16 A A 0.4270
17 T A 0.0097
18 P A -0.4542
19 T A -0.3854
20 S A -0.2190
21 L A 0.0000
22 L A 0.8255
23 I A 0.0000
24 S A -0.3802
25 W A 0.0000
26 D A -1.3592
27 A A 0.0015
28 Y A 1.1117
29 Y A 2.0151
30 Y A 2.1357
31 S A 1.4191
32 S A 0.7954
33 W A 1.3424
34 G A 0.9343
35 V A 0.8683
36 G A -0.1869
37 Y A -0.2441
38 Y A 0.0000
39 R A -0.5381
40 I A 0.0000
41 T A 0.0000
42 Y A -0.4646
43 G A 0.0000
44 E A -1.3450
45 T A -1.2253
46 G A -1.2157
47 G A -1.3883
48 N A -1.5333
49 S A -0.8872
50 P A -0.4095
51 V A 0.2678
52 Q A -1.2015
53 E A -1.8076
54 F A -0.7597
55 T A -0.2994
56 V A 0.0000
57 P A -0.3657
58 G A -0.0563
59 S A -0.1668
60 S A -0.3614
61 S A -0.4512
62 T A -0.1616
63 A A 0.0000
64 T A 0.2844
65 I A 0.0000
66 S A -0.4644
67 G A -0.6767
68 L A 0.0000
69 S A -0.7148
70 P A -0.7174
71 G A -0.7959
72 V A -0.7519
73 D A -1.7338
74 Y A 0.0000
75 T A -0.8510
76 I A 0.0000
77 T A -0.3123
78 V A 0.0000
79 Y A 0.1651
80 A A 0.0000
81 Y A 0.4595
82 W A 0.7796
83 G A -0.1899
84 D A -1.0743
85 Y A 0.7674
86 W A 1.4364
87 P A 0.7757
88 V A 1.0384
89 H A 0.1340
90 S A -0.3149
91 P A -0.2676
92 I A 0.0000
93 S A -0.4559
94 I A 0.0000
95 N A -1.9497
96 Y A -1.4540
97 R A -2.1478
98 T A 0.0000
99 C A 0.0036
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Laboratory of Theory of Biopolymers 2018