| Chain sequence(s) |
B: ALRAALDAVMKELKAFKERHKKEGTPALEALKELIKIAEKAGEAKKALAA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:32)
[INFO] Main: Simulation completed successfully. (00:02:32)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | B | -0.3681 | |
| 2 | L | B | -1.1278 | |
| 3 | R | B | -2.0531 | |
| 4 | A | B | -1.0832 | |
| 5 | A | B | -1.4396 | |
| 6 | L | B | -1.8097 | |
| 7 | D | B | -2.2138 | |
| 8 | A | B | -1.7777 | |
| 9 | V | B | 0.0000 | |
| 10 | M | B | -1.0897 | |
| 11 | K | B | -2.7427 | |
| 12 | E | B | -2.4290 | |
| 13 | L | B | -2.1509 | |
| 14 | K | B | -3.0847 | |
| 15 | A | B | -2.8000 | |
| 16 | F | B | 0.0000 | |
| 17 | K | B | -3.7802 | |
| 18 | E | B | -4.3074 | |
| 19 | R | B | -4.8107 | |
| 20 | H | B | -4.2968 | |
| 21 | K | B | -4.4924 | |
| 22 | K | B | -4.6781 | |
| 23 | E | B | -4.3256 | |
| 24 | G | B | -2.8925 | |
| 25 | T | B | -1.9017 | |
| 26 | P | B | -0.2391 | |
| 27 | A | B | 0.3645 | |
| 28 | L | B | 0.9533 | |
| 29 | E | B | -0.6593 | |
| 30 | A | B | 0.0000 | |
| 31 | L | B | 0.9116 | |
| 32 | K | B | -1.1368 | |
| 33 | E | B | -1.4287 | |
| 34 | L | B | -0.3045 | |
| 35 | I | B | -0.2946 | |
| 36 | K | B | -2.1677 | |
| 37 | I | B | 0.0000 | |
| 38 | A | B | -1.4795 | |
| 39 | E | B | -3.2472 | |
| 40 | K | B | -3.2077 | |
| 41 | A | B | -2.4500 | |
| 42 | G | B | -3.1638 | |
| 43 | E | B | -3.7622 | |
| 44 | A | B | 0.0000 | |
| 45 | K | B | -3.4103 | |
| 46 | K | B | -3.0620 | |
| 47 | A | B | -1.5413 | |
| 48 | L | B | -1.0987 | |
| 49 | A | B | -0.9876 | |
| 50 | A | B | -0.4675 |