Project name: 2E6

Status: done

Started: 2025-08-08 05:04:18
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Chain sequence(s) H: QLQLVESGGGLVQAGDSLRLACAASGRTFSTYAMGWFRQAPGKEREFVAAVNWAGDMTYYADSVKGRFTISRDNAKNTVYLQMDSLKPEDTAVYYCAAEGRGLTRWSQTVAEYDYWGQGTQVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:51)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:52)
Show buried residues

Minimal score value
-3.3942
Maximal score value
1.0452
Average score
-0.7136
Total score value
-89.912

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.9003
2 L H 0.0000
3 Q H -1.2140
4 L H 0.0000
5 V H 0.8348
6 E H 0.0000
7 S H -0.3082
8 G H -0.8978
9 G H -0.5365
11 G H 0.1221
12 L H 1.0452
13 V H -0.2474
14 Q H -1.6086
15 A H -2.0649
16 G H -1.9365
17 D H -1.9210
18 S H -1.6054
19 L H -0.7535
20 R H -1.2509
21 L H 0.0000
22 A H -0.1236
23 C H 0.0000
24 A H -0.2776
25 A H 0.0000
26 S H -1.2383
27 G H -2.0308
28 R H -2.3648
29 T H -1.2749
30 F H 0.0000
35 S H -0.3774
36 T H -0.2626
37 Y H 0.1731
38 A H 0.1732
39 M H 0.0000
40 G H 0.0000
41 W H 0.0000
42 F H 0.0000
43 R H 0.0000
44 Q H -1.7292
45 A H -1.6705
46 P H -1.3161
47 G H -1.8836
48 K H -3.2548
49 E H -3.3942
50 R H -2.2371
51 E H -2.1312
52 F H -0.6479
53 V H 0.0000
54 A H 0.0000
55 A H 0.0000
56 V H 0.0000
57 N H 0.1066
58 W H 0.7308
59 A H -0.1016
62 G H -0.6793
63 D H -1.2881
64 M H 0.2433
65 T H 0.2052
66 Y H -0.0185
67 Y H -0.9043
68 A H -1.5381
69 D H -2.4894
70 S H -1.7115
71 V H 0.0000
72 K H -2.6102
74 G H -1.8034
75 R H -1.6039
76 F H 0.0000
77 T H -0.6928
78 I H 0.0000
79 S H -0.4656
80 R H -0.9436
81 D H -1.3346
82 N H -1.4018
83 A H -1.3692
84 K H -2.2438
85 N H -2.0476
86 T H 0.0000
87 V H 0.0000
88 Y H -0.1784
89 L H 0.0000
90 Q H -0.7811
91 M H 0.0000
92 D H -1.7106
93 S H -1.7038
94 L H 0.0000
95 K H -2.9717
96 P H -2.0747
97 E H -2.4605
98 D H 0.0000
99 T H -0.8490
100 A H 0.0000
101 V H -0.1988
102 Y H 0.0000
103 Y H -0.1040
104 C H 0.0000
105 A H 0.0000
106 A H 0.0000
107 E H 0.0000
108 G H -0.9501
109 R H -0.9077
110 G H -0.2024
111 L H 0.5467
111A T H -0.3034
111B R H -1.5948
111C W H -0.5585
112C S H 0.0000
112B Q H -1.3292
112A T H -0.4781
112 V H 0.1438
113 A H -0.1655
114 E H -0.9168
115 Y H 0.0000
116 D H -1.2572
117 Y H -0.5572
118 W H -0.0058
119 G H -0.1907
120 Q H -0.9326
121 G H 0.0000
122 T H -0.4673
123 Q H -0.6863
124 V H 0.0000
125 T H -0.2350
126 V H 0.0000
127 S H -0.8559
128 S H -0.9028
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Laboratory of Theory of Biopolymers 2018