| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDAPAVTVDYYHITYGETGGGSSGQEFTVPGSKSTATISGLSPGVDYTITVYAWMYDGYEYTYQGTSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:33)
[INFO] Main: Simulation completed successfully. (00:00:33)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.8345 | |
| 2 | S | A | 0.7410 | |
| 3 | S | A | 0.6364 | |
| 4 | V | A | 0.5554 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.2833 | |
| 7 | K | A | -2.3785 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.7878 | |
| 10 | V | A | 0.0747 | |
| 11 | V | A | 1.5186 | |
| 12 | A | A | 0.8777 | |
| 13 | A | A | 0.2957 | |
| 14 | T | A | -0.3887 | |
| 15 | P | A | -0.8101 | |
| 16 | T | A | -0.5337 | |
| 17 | S | A | -0.3265 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7112 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.7837 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -1.7181 | |
| 24 | A | A | -0.7785 | |
| 25 | P | A | 0.3151 | |
| 26 | A | A | 0.6571 | |
| 27 | V | A | 0.8645 | |
| 28 | T | A | 0.3173 | |
| 29 | V | A | 0.0000 | |
| 30 | D | A | -0.1363 | |
| 31 | Y | A | 0.5409 | |
| 32 | Y | A | 0.0000 | |
| 33 | H | A | 0.1394 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -1.1699 | |
| 36 | Y | A | 0.0000 | |
| 37 | G | A | -1.5748 | |
| 38 | E | A | -1.6919 | |
| 39 | T | A | -1.4014 | |
| 40 | G | A | -1.1003 | |
| 41 | G | A | -1.2706 | |
| 42 | G | A | -1.0687 | |
| 43 | S | A | -1.1419 | |
| 44 | S | A | -1.2471 | |
| 45 | G | A | -1.7583 | |
| 46 | Q | A | -2.3385 | |
| 47 | E | A | -2.2951 | |
| 48 | F | A | -0.6948 | |
| 49 | T | A | 0.0337 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -0.6234 | |
| 52 | G | A | -0.7524 | |
| 53 | S | A | -1.1500 | |
| 54 | K | A | -1.9601 | |
| 55 | S | A | -1.1216 | |
| 56 | T | A | -0.6450 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2815 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.4788 | |
| 61 | G | A | -0.8139 | |
| 62 | L | A | 0.0000 | |
| 63 | S | A | -0.8529 | |
| 64 | P | A | -1.0013 | |
| 65 | G | A | -1.0917 | |
| 66 | V | A | -0.9199 | |
| 67 | D | A | -1.9130 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -1.0448 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.3673 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | 0.6280 | |
| 74 | A | A | 0.0000 | |
| 75 | W | A | 0.8834 | |
| 76 | M | A | 0.0000 | |
| 77 | Y | A | 0.7677 | |
| 78 | D | A | -0.4563 | |
| 79 | G | A | -0.2573 | |
| 80 | Y | A | 0.3638 | |
| 81 | E | A | -0.6769 | |
| 82 | Y | A | 0.5877 | |
| 83 | T | A | 0.5181 | |
| 84 | Y | A | 0.9845 | |
| 85 | Q | A | 0.1935 | |
| 86 | G | A | -0.0380 | |
| 87 | T | A | -0.1130 | |
| 88 | S | A | -0.1251 | |
| 89 | P | A | 0.1093 | |
| 90 | I | A | -0.1057 | |
| 91 | S | A | -0.5405 | |
| 92 | I | A | -0.7636 | |
| 93 | N | A | -1.7803 | |
| 94 | Y | A | -1.4632 | |
| 95 | R | A | -2.3554 | |
| 96 | T | A | -1.3211 |