| Chain sequence(s) |
A: MSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQY
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:17)
[INFO] Main: Simulation completed successfully. (00:01:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.0022 | |
| 2 | S | A | -1.5057 | |
| 3 | R | A | -3.0065 | |
| 4 | R | A | -3.1782 | |
| 5 | N | A | -2.1321 | |
| 6 | T | A | -1.2181 | |
| 7 | D | A | -1.6645 | |
| 8 | A | A | -1.0876 | |
| 9 | I | A | 0.8403 | |
| 10 | T | A | 0.1574 | |
| 11 | I | A | 0.0000 | |
| 12 | H | A | -0.8724 | |
| 13 | S | A | -0.7783 | |
| 14 | I | A | 0.0000 | |
| 15 | L | A | -1.2797 | |
| 16 | D | A | -2.9148 | |
| 17 | W | A | -1.7460 | |
| 18 | I | A | 0.0000 | |
| 19 | E | A | -2.6568 | |
| 20 | D | A | -2.8656 | |
| 21 | N | A | -1.5920 | |
| 22 | L | A | -0.3741 | |
| 23 | E | A | -1.6703 | |
| 24 | S | A | -0.7719 | |
| 25 | P | A | -0.3632 | |
| 26 | L | A | -0.2388 | |
| 27 | S | A | -0.7598 | |
| 28 | L | A | -1.3689 | |
| 29 | E | A | -2.7127 | |
| 30 | K | A | -3.1063 | |
| 31 | V | A | 0.0000 | |
| 32 | S | A | -2.5426 | |
| 33 | E | A | -3.7045 | |
| 34 | R | A | -3.3332 | |
| 35 | S | A | -2.0505 | |
| 36 | G | A | -1.7128 | |
| 37 | Y | A | -0.7098 | |
| 38 | S | A | -0.7376 | |
| 39 | K | A | -1.4114 | |
| 40 | W | A | 0.0174 | |
| 41 | H | A | -0.8669 | |
| 42 | L | A | 0.0000 | |
| 43 | Q | A | -1.9149 | |
| 44 | R | A | -3.1590 | |
| 45 | M | A | 0.0000 | |
| 46 | F | A | 0.0000 | |
| 47 | K | A | -3.7592 | |
| 48 | K | A | -3.8138 | |
| 49 | E | A | -3.1382 | |
| 50 | T | A | -1.9526 | |
| 51 | G | A | -2.3492 | |
| 52 | H | A | -2.4958 | |
| 53 | S | A | -2.0125 | |
| 54 | L | A | -0.9104 | |
| 55 | G | A | -0.6901 | |
| 56 | Q | A | -1.1358 | |
| 57 | Y | A | 0.2480 |