| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAPAVTVDYYVITYGETGVGWVPGQTFEVPGSKSTATISGLKPGVDYTITVYAYHEYYFISPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:29)
[INFO] Main: Simulation completed successfully. (00:00:30)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.4620 | |
| 2 | S | A | -0.1504 | |
| 3 | D | A | -1.0978 | |
| 4 | V | A | -0.8010 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -3.7516 | |
| 7 | D | A | -3.6149 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.2076 | |
| 10 | V | A | 0.0835 | |
| 11 | V | A | 1.5429 | |
| 12 | A | A | 0.8984 | |
| 13 | A | A | 0.3046 | |
| 14 | T | A | -0.3484 | |
| 15 | P | A | -1.1251 | |
| 16 | T | A | -1.0020 | |
| 17 | S | A | -0.5366 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7454 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.2027 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.3975 | |
| 24 | A | A | -1.8839 | |
| 25 | P | A | -0.8294 | |
| 26 | A | A | 0.1577 | |
| 27 | V | A | 0.3511 | |
| 28 | T | A | -0.4497 | |
| 29 | V | A | 0.0000 | |
| 30 | D | A | -1.0527 | |
| 31 | Y | A | -0.8938 | |
| 32 | Y | A | 0.0000 | |
| 33 | V | A | 0.1137 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -0.4603 | |
| 36 | Y | A | 0.0000 | |
| 37 | G | A | -0.3818 | |
| 38 | E | A | -0.8388 | |
| 39 | T | A | -0.6251 | |
| 40 | G | A | 0.2072 | |
| 41 | V | A | 1.4816 | |
| 42 | G | A | 0.8826 | |
| 43 | W | A | 1.5205 | |
| 44 | V | A | 1.1845 | |
| 45 | P | A | 0.0820 | |
| 46 | G | A | -0.1566 | |
| 47 | Q | A | -1.1355 | |
| 48 | T | A | -0.7743 | |
| 49 | F | A | -0.6017 | |
| 50 | E | A | -1.3757 | |
| 51 | V | A | 0.0000 | |
| 52 | P | A | -1.2362 | |
| 53 | G | A | -1.2135 | |
| 54 | S | A | -1.2558 | |
| 55 | K | A | -2.0048 | |
| 56 | S | A | -1.3990 | |
| 57 | T | A | -0.7736 | |
| 58 | A | A | 0.0000 | |
| 59 | T | A | 0.2913 | |
| 60 | I | A | 0.0000 | |
| 61 | S | A | -0.7826 | |
| 62 | G | A | -1.1596 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.3893 | |
| 65 | P | A | -1.6602 | |
| 66 | G | A | -1.4381 | |
| 67 | V | A | -1.4409 | |
| 68 | D | A | -1.8959 | |
| 69 | Y | A | 0.0000 | |
| 70 | T | A | -0.8977 | |
| 71 | I | A | 0.0000 | |
| 72 | T | A | -0.0214 | |
| 73 | V | A | 0.0000 | |
| 74 | Y | A | 0.8442 | |
| 75 | A | A | 0.0000 | |
| 76 | Y | A | 1.3047 | |
| 77 | H | A | 0.1034 | |
| 78 | E | A | -0.8062 | |
| 79 | Y | A | 1.4692 | |
| 80 | Y | A | 2.3422 | |
| 81 | F | A | 2.7037 | |
| 82 | I | A | 1.4258 | |
| 83 | S | A | 0.3801 | |
| 84 | P | A | 0.1257 | |
| 85 | I | A | -0.2453 | |
| 86 | S | A | -0.6912 | |
| 87 | I | A | -0.7538 | |
| 88 | N | A | -1.7800 | |
| 89 | Y | A | -1.5159 | |
| 90 | R | A | -2.5518 | |
| 91 | T | A | -1.5205 |