| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEPVHPGADVRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRAGPEGVPLPAAPPPSPLYTPPPPTSPYAVPPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPENNVYNPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9499 | |
| 2 | L | A | 1.9722 | |
| 3 | P | A | 0.6481 | |
| 4 | P | A | 0.3463 | |
| 5 | T | A | 0.1120 | |
| 6 | T | A | 0.1285 | |
| 7 | P | A | 0.1697 | |
| 8 | V | A | 1.2210 | |
| 9 | A | A | 0.0263 | |
| 10 | K | A | -1.1486 | |
| 11 | V | A | -0.3845 | |
| 12 | Q | A | -1.4961 | |
| 13 | S | A | -1.5817 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3929 | |
| 16 | E | A | -2.4225 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4643 | |
| 20 | P | A | 0.1097 | |
| 21 | T | A | 0.1133 | |
| 22 | S | A | -0.1716 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1083 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2849 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8748 | |
| 31 | R | A | -2.6416 | |
| 32 | L | A | -0.7723 | |
| 33 | L | A | 1.1758 | |
| 34 | T | A | 1.5563 | |
| 35 | V | A | 1.8425 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2151 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6113 | |
| 40 | K | A | -1.6374 | |
| 41 | D | A | -0.9335 | |
| 42 | I | A | 0.8110 | |
| 43 | V | A | 1.0168 | |
| 44 | K | A | -1.1930 | |
| 45 | N | A | -1.9303 | |
| 46 | G | A | -1.2395 | |
| 47 | K | A | -0.9454 | |
| 48 | V | A | 1.5032 | |
| 49 | V | A | 2.0655 | |
| 50 | V | A | 1.2896 | |
| 51 | P | A | 0.4703 | |
| 52 | K | A | -0.6346 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1722 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.5128 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3086 | |
| 70 | K | A | -1.8269 | |
| 71 | F | A | -0.6868 | |
| 72 | A | A | -0.5766 | |
| 73 | L | A | -0.9287 | |
| 74 | P | A | -1.2560 | |
| 75 | Q | A | -2.4660 | |
| 76 | K | A | -3.0846 | |
| 77 | D | A | -2.9809 | |
| 78 | F | A | -1.6243 | |
| 79 | Y | A | -1.8975 | |
| 80 | D | A | -2.7318 | |
| 81 | P | A | -2.3358 | |
| 82 | E | A | -3.0535 | |
| 83 | K | A | -3.4285 | |
| 84 | E | A | -2.4813 | |
| 85 | R | A | -1.2930 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6363 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -1.0162 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3493 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6831 | |
| 99 | G | A | -0.5508 | |
| 100 | P | A | -0.4323 | |
| 101 | L | A | -0.0186 | |
| 102 | G | A | -0.2402 | |
| 103 | K | A | -0.6555 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4443 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1573 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4142 | |
| 110 | L | A | 0.3664 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -0.9819 | |
| 113 | K | A | -0.2730 | |
| 114 | L | A | -0.6130 | |
| 115 | G | A | -1.0079 | |
| 116 | D | A | -1.6475 | |
| 117 | T | A | -1.3562 | |
| 118 | E | A | -2.6280 | |
| 119 | N | A | -2.6331 | |
| 120 | P | A | -2.1285 | |
| 121 | T | A | -1.7384 | |
| 122 | E | A | -2.3329 | |
| 123 | P | A | -1.2081 | |
| 124 | V | A | -0.7297 | |
| 125 | H | A | -1.2187 | |
| 126 | P | A | -1.1059 | |
| 127 | G | A | -1.1239 | |
| 128 | A | A | -1.2607 | |
| 129 | D | A | -1.8420 | |
| 130 | V | A | -0.9224 | |
| 131 | R | A | -0.6932 | |
| 132 | V | A | 0.4093 | |
| 133 | A | A | 0.4300 | |
| 134 | F | A | 0.2822 | |
| 135 | S | A | -0.0622 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6726 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5614 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2333 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1349 | |
| 157 | D | A | 0.3327 | |
| 158 | L | A | 0.8509 | |
| 159 | A | A | 0.1780 | |
| 160 | E | A | -1.4445 | |
| 161 | P | A | -0.2177 | |
| 162 | C | A | 0.1841 | |
| 163 | P | A | -0.1674 | |
| 164 | G | A | -0.0755 | |
| 165 | L | A | 0.5871 | |
| 166 | P | A | -0.1151 | |
| 167 | P | A | -0.3408 | |
| 168 | G | A | -0.4217 | |
| 169 | A | A | 0.2839 | |
| 170 | C | A | 1.0080 | |
| 171 | P | A | 0.5366 | |
| 172 | P | A | 0.7762 | |
| 173 | I | A | 1.9694 | |
| 174 | Q | A | 0.8322 | |
| 175 | L | A | 1.4680 | |
| 176 | V | A | 0.8300 | |
| 177 | N | A | -0.3395 | |
| 178 | S | A | 0.0140 | |
| 179 | V | A | 0.4185 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3727 | |
| 182 | D | A | 0.0660 | |
| 183 | G | A | -0.1614 | |
| 184 | D | A | -0.5762 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1664 | |
| 190 | F | A | 0.0518 | |
| 191 | G | A | -0.1118 | |
| 192 | N | A | -0.2894 | |
| 193 | M | A | -0.1539 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4180 | |
| 197 | E | A | -2.5754 | |
| 198 | L | A | -1.2079 | |
| 199 | Q | A | -2.5393 | |
| 200 | Q | A | -3.3486 | |
| 201 | D | A | -3.6031 | |
| 202 | R | A | -3.3487 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2115 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3782 | |
| 211 | S | A | -1.9216 | |
| 212 | T | A | -1.4894 | |
| 213 | R | A | -2.1888 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1736 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3422 | |
| 220 | L | A | 0.5446 | |
| 221 | K | A | -1.2254 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8627 | |
| 224 | N | A | -1.5455 | |
| 225 | E | A | -1.2994 | |
| 226 | A | A | -0.6712 | |
| 227 | Y | A | -0.4120 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6990 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0958 | |
| 234 | F | A | 0.2875 | |
| 235 | G | A | -0.8110 | |
| 236 | R | A | -2.6004 | |
| 237 | R | A | -2.8784 | |
| 238 | E | A | -2.0287 | |
| 239 | Q | A | -0.0421 | |
| 240 | V | A | 1.6221 | |
| 241 | Y | A | 1.2903 | |
| 242 | A | A | 0.2043 | |
| 243 | R | A | -1.2630 | |
| 244 | H | A | -1.1230 | |
| 245 | F | A | -0.1381 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.7066 | |
| 249 | A | A | -1.0004 | |
| 250 | G | A | -1.1221 | |
| 251 | P | A | -0.7335 | |
| 252 | E | A | -0.4780 | |
| 253 | G | A | 0.0327 | |
| 254 | V | A | 1.3007 | |
| 255 | P | A | 0.3457 | |
| 256 | L | A | 1.0110 | |
| 257 | P | A | 0.4848 | |
| 258 | A | A | 0.1629 | |
| 259 | A | A | 0.0066 | |
| 260 | P | A | -0.5160 | |
| 261 | P | A | -0.4023 | |
| 262 | P | A | -0.3056 | |
| 263 | S | A | 0.1387 | |
| 264 | P | A | 0.4247 | |
| 265 | L | A | 1.5455 | |
| 266 | Y | A | 0.9283 | |
| 267 | T | A | 0.1156 | |
| 268 | P | A | 0.2420 | |
| 269 | P | A | 0.2203 | |
| 270 | P | A | -0.3036 | |
| 271 | P | A | -0.0338 | |
| 272 | T | A | -0.1493 | |
| 273 | S | A | 0.3570 | |
| 274 | P | A | 0.5674 | |
| 275 | Y | A | 1.6266 | |
| 276 | A | A | 1.2249 | |
| 277 | V | A | 2.1249 | |
| 278 | P | A | 1.1470 | |
| 279 | P | A | 0.2072 | |
| 280 | P | A | -0.0599 | |
| 281 | T | A | -0.1631 | |
| 282 | D | A | -0.7800 | |
| 283 | Y | A | 0.7822 | |
| 284 | F | A | 0.6875 | |
| 285 | G | A | 0.1646 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9736 | |
| 291 | L | A | 1.6581 | |
| 292 | V | A | 0.6504 | |
| 293 | S | A | -0.1568 | |
| 294 | S | A | -0.9968 | |
| 295 | D | A | -1.8717 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | -1.0779 | |
| 298 | L | A | -1.2226 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.7506 | |
| 301 | R | A | -2.0741 | |
| 302 | P | A | -1.0491 | |
| 303 | F | A | -0.1906 | |
| 304 | W | A | -0.5244 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0781 | |
| 307 | R | A | -2.8274 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2487 | |
| 310 | G | A | -1.2249 | |
| 311 | N | A | -1.3026 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9610 | |
| 319 | N | A | -0.9207 | |
| 320 | E | A | -1.0702 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3622 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0814 | |
| 333 | N | A | 0.5785 | |
| 334 | F | A | 1.8076 | |
| 335 | T | A | 0.9158 | |
| 336 | I | A | 0.4921 | |
| 337 | S | A | -0.9477 | |
| 338 | Q | A | -1.7437 | |
| 339 | Q | A | -1.3126 | |
| 340 | L | A | 0.6548 | |
| 341 | C | A | 0.2884 | |
| 342 | T | A | -0.3022 | |
| 343 | P | A | -0.8668 | |
| 344 | E | A | -2.2408 | |
| 345 | N | A | -2.0456 | |
| 346 | N | A | -1.4114 | |
| 347 | V | A | 0.6391 | |
| 348 | Y | A | 1.0090 | |
| 349 | N | A | -0.1286 | |
| 350 | P | A | -0.3818 | |
| 351 | S | A | -0.2966 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.7717 | |
| 354 | K | A | -1.8032 | |
| 355 | N | A | -1.7766 | |
| 356 | Y | A | -0.0526 | |
| 357 | L | A | 0.6886 | |
| 358 | R | A | 1.0150 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3859 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0234 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9258 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6650 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3061 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3198 | |
| 376 | L | A | -1.7455 | |
| 377 | D | A | -2.0518 | |
| 378 | P | A | -1.0733 | |
| 379 | G | A | -1.0272 | |
| 380 | V | A | -0.9369 | |
| 381 | L | A | -0.5511 | |
| 382 | A | A | -0.6670 | |
| 383 | H | A | -0.8506 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4082 | |
| 386 | T | A | -0.5721 | |
| 387 | M | A | -0.3323 | |
| 388 | N | A | -0.8703 | |
| 389 | P | A | -1.2843 | |
| 390 | T | A | -1.5844 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5527 | |
| 393 | E | A | -2.9706 | |
| 394 | N | A | -2.7613 | |
| 395 | W | A | -1.5506 | |
| 396 | N | A | -1.3599 | |
| 397 | L | A | -0.2026 | |
| 398 | G | A | 0.5489 | |
| 399 | F | A | 2.4247 | |
| 400 | V | A | 1.8481 | |
| 401 | P | A | 0.0552 | |
| 402 | P | A | -1.9567 | |
| 403 | K | A | -3.6019 | |
| 404 | E | A | -4.0020 | |
| 405 | R | A | -4.4418 | |
| 406 | E | A | -4.0141 | |
| 407 | D | A | -2.9874 | |
| 408 | P | A | -1.8274 | |
| 409 | Y | A | -0.9885 | |
| 410 | K | A | -2.1019 | |
| 411 | G | A | -0.6415 | |
| 412 | L | A | 0.6639 | |
| 413 | I | A | 1.5776 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4004 | |
| 416 | E | A | -1.6794 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9520 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0953 | |
| 421 | E | A | -2.8109 | |
| 422 | R | A | -2.6832 | |
| 423 | F | A | -1.3210 | |
| 424 | S | A | -1.4778 | |
| 425 | Q | A | -1.8782 | |
| 426 | D | A | -2.9019 | |
| 427 | L | A | -2.0088 | |
| 428 | D | A | -2.8049 | |
| 429 | Q | A | -2.6257 | |
| 430 | F | A | -1.4486 | |
| 431 | A | A | -0.9137 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6174 | |
| 435 | K | A | -0.7489 | |
| 436 | F | A | 0.1445 | |
| 437 | L | A | 1.0168 | |
| 438 | Y | A | 0.8127 | |
| 439 | Q | A | -0.2737 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine