Project name: 64931d368244a99

Status: done

Started: 2025-03-05 09:56:14
Settings
Chain sequence(s) A: MVKVKFKYKGEEKEVDTSKIKKVWRVGKMVSFTYDDNGKTGRGAVSEKDAPKELLDMLARAEREKK
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:46)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:46)
Show buried residues

Minimal score value
-5.1011
Maximal score value
0.5717
Average score
-2.0629
Total score value
-136.1492

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.5717
2 V A -0.9242
3 K A -2.8248
4 V A 0.0000
5 K A -4.0747
6 F A 0.0000
7 K A -4.0058
8 Y A -2.8684
9 K A -2.9478
10 G A -2.9688
11 E A -3.9636
12 E A -4.5800
13 K A -4.1173
14 E A -4.0580
15 V A 0.0000
16 D A -2.2955
17 T A -1.6481
18 S A -1.6250
19 K A -3.1038
20 I A 0.0000
21 K A -3.1144
22 K A -2.6545
23 V A 0.0000
24 W A -0.6582
25 R A -0.6771
26 V A 0.5663
27 G A -0.6692
28 K A -1.8616
29 M A -0.7019
30 V A 0.0000
31 S A 0.0000
32 F A 0.0000
33 T A 0.0000
34 Y A 0.0000
35 D A -3.6005
36 D A -2.8889
37 N A -2.7181
38 G A -2.3857
39 K A -2.9922
40 T A -2.3785
41 G A 0.0000
42 R A -2.4870
43 G A 0.0000
44 A A -0.8051
45 V A 0.0000
46 S A -1.6896
47 E A -2.3271
48 K A -3.1261
49 D A -3.1474
50 A A -2.4663
51 P A -2.5324
52 K A -2.9894
53 E A -2.4472
54 L A 0.0000
55 L A -2.0244
56 D A -3.0661
57 M A -2.5269
58 L A 0.0000
59 A A -2.8530
60 R A -3.7479
61 A A -3.8664
62 E A -4.3392
63 R A -4.8770
64 E A -5.1011
65 K A -4.1731
66 K A -3.3879
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Laboratory of Theory of Biopolymers 2018