| Chain sequence(s) |
C: DARRKAEMLQNEAKTLLAQANSKLQLLKDLERKYEDNQRYLEDKAQELARLEGEVRSLLKDISQKVAVYSTCL
B: ENVERWQGQYEGLRGQDLGQAVLDAGHSVSTLEKTLPQLLAKLSILENRGVHNASLALSASIGRVRELCAQARGAASKVKV D: DTVDLNKLNEIEGTLNKAKDEMKVSDLDRKVSDLENEAKKQEAAIMDYNRDIEEIMKCIRNLEDIRKTLPSGCFNTPSIEKP input PDB |
| Selected Chain(s) | B,C,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | LH39B |
| Energy difference between WT (input) and mutated protein (by FoldX) | 6.97442 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] FoldX: Building mutant model (00:05:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:05:35)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:09:36)
[INFO] Main: Simulation completed successfully. (00:09:39)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | B | -2.8729 | |
| 2 | N | B | -2.3170 | |
| 3 | V | B | -0.8212 | |
| 4 | E | B | -2.9636 | |
| 5 | R | B | -3.2710 | |
| 6 | W | B | -1.2774 | |
| 7 | Q | B | -1.8822 | |
| 8 | G | B | -2.4965 | |
| 9 | Q | B | -2.0969 | |
| 10 | Y | B | -1.6877 | |
| 11 | E | B | -2.8716 | |
| 12 | G | B | -2.0320 | |
| 13 | L | B | -1.1758 | |
| 14 | R | B | -2.9593 | |
| 15 | G | B | -2.9618 | |
| 16 | Q | B | -2.5338 | |
| 17 | D | B | -2.6034 | |
| 18 | L | B | -2.5298 | |
| 19 | G | B | -1.6249 | |
| 20 | Q | B | -1.5712 | |
| 21 | A | B | 0.0000 | |
| 22 | V | B | 0.0000 | |
| 23 | L | B | 0.0447 | |
| 24 | D | B | -1.0134 | |
| 25 | A | B | 0.0000 | |
| 26 | G | B | -1.0353 | |
| 27 | H | B | -1.2936 | |
| 28 | S | B | -1.3865 | |
| 29 | V | B | 0.0000 | |
| 30 | S | B | -1.5292 | |
| 31 | T | B | -1.7213 | |
| 32 | L | B | 0.0000 | |
| 33 | E | B | -3.1277 | |
| 34 | K | B | -2.8521 | |
| 35 | T | B | -1.8441 | |
| 36 | L | B | 0.0000 | |
| 37 | P | B | -1.5483 | |
| 38 | Q | B | -1.5182 | |
| 39 | H | B | 0.0000 | mutated: LH39B |
| 40 | L | B | -0.0931 | |
| 41 | A | B | -0.0087 | |
| 42 | K | B | -0.3638 | |
| 43 | L | B | 0.0000 | |
| 44 | S | B | -0.3272 | |
| 45 | I | B | 0.5999 | |
| 46 | L | B | 0.0000 | |
| 47 | E | B | -1.9865 | |
| 48 | N | B | -1.5119 | |
| 49 | R | B | -0.8959 | |
| 50 | G | B | -0.4763 | |
| 51 | V | B | 0.8614 | |
| 52 | H | B | 0.0558 | |
| 53 | N | B | -0.5657 | |
| 54 | A | B | 0.0000 | |
| 55 | S | B | 0.4183 | |
| 56 | L | B | 1.2985 | |
| 57 | A | B | 0.3353 | |
| 58 | L | B | 0.0000 | |
| 59 | S | B | -0.0528 | |
| 60 | A | B | -0.0386 | |
| 61 | S | B | -0.6998 | |
| 62 | I | B | 0.0000 | |
| 63 | G | B | -1.8939 | |
| 64 | R | B | -2.3732 | |
| 65 | V | B | 0.0000 | |
| 66 | R | B | -2.8554 | |
| 67 | E | B | -3.2121 | |
| 68 | L | B | 0.0000 | |
| 69 | C | B | 0.0000 | |
| 70 | A | B | -1.8769 | |
| 71 | Q | B | -2.0018 | |
| 72 | A | B | 0.0000 | |
| 73 | R | B | -2.1813 | |
| 74 | G | B | -1.5453 | |
| 75 | A | B | -1.6758 | |
| 76 | A | B | 0.0000 | |
| 77 | S | B | -1.6041 | |
| 78 | K | B | -2.2199 | |
| 79 | V | B | 0.0000 | |
| 80 | K | B | -1.2967 | |
| 81 | V | B | 0.6477 | |
| 1 | D | C | -2.6009 | |
| 2 | A | C | -2.3753 | |
| 3 | R | C | -3.1943 | |
| 4 | R | C | -3.2823 | |
| 5 | K | C | -2.4827 | |
| 6 | A | C | 0.0000 | |
| 7 | E | C | -2.8242 | |
| 8 | M | C | -1.8922 | |
| 9 | L | C | 0.0000 | |
| 10 | Q | C | -2.2011 | |
| 11 | N | C | -2.3943 | |
| 12 | E | C | -2.2338 | |
| 13 | A | C | 0.0000 | |
| 14 | K | C | -2.2936 | |
| 15 | T | C | -1.5614 | |
| 16 | L | C | -1.2016 | |
| 17 | L | C | -1.5376 | |
| 18 | A | C | -1.1323 | |
| 19 | Q | C | -1.5213 | |
| 20 | A | C | 0.0000 | |
| 21 | N | C | -1.6116 | |
| 22 | S | C | -1.4506 | |
| 23 | K | C | -1.7102 | |
| 24 | L | C | -1.5352 | |
| 25 | Q | C | -2.0751 | |
| 26 | L | C | -1.3350 | |
| 27 | L | C | 0.0000 | |
| 28 | K | C | -2.3406 | |
| 29 | D | C | -2.5586 | |
| 30 | L | C | 0.0000 | |
| 31 | E | C | -2.6143 | |
| 32 | R | C | -3.8186 | |
| 33 | K | C | -3.5216 | |
| 34 | Y | C | -2.9065 | |
| 35 | E | C | -3.5729 | |
| 36 | D | C | -3.6850 | |
| 37 | N | C | 0.0000 | |
| 38 | Q | C | -2.4918 | |
| 39 | R | C | -3.1153 | |
| 40 | Y | C | -1.9319 | |
| 41 | L | C | 0.0000 | |
| 42 | E | C | -2.6743 | |
| 43 | D | C | -3.0325 | |
| 44 | K | C | -2.3180 | |
| 45 | A | C | -1.8902 | |
| 46 | Q | C | -2.7893 | |
| 47 | E | C | -2.6106 | |
| 48 | L | C | 0.0000 | |
| 49 | A | C | -1.9975 | |
| 50 | R | C | -2.8133 | |
| 51 | L | C | 0.0000 | |
| 52 | E | C | 0.0000 | |
| 53 | G | C | -2.0829 | |
| 54 | E | C | -2.4300 | |
| 55 | V | C | 0.0000 | |
| 56 | R | C | -2.3969 | |
| 57 | S | C | -2.0321 | |
| 58 | L | C | 0.0000 | |
| 59 | L | C | -2.3720 | |
| 60 | K | C | -2.9994 | |
| 61 | D | C | -2.7024 | |
| 62 | I | C | 0.0000 | |
| 63 | S | C | -2.0910 | |
| 64 | Q | C | -2.0022 | |
| 65 | K | C | -1.5164 | |
| 66 | V | C | 0.0000 | |
| 67 | A | C | -0.4019 | |
| 68 | V | C | 0.9001 | |
| 69 | Y | C | 0.6689 | |
| 70 | S | C | 0.3101 | |
| 71 | T | C | 0.8508 | |
| 72 | C | C | 1.4475 | |
| 73 | L | C | 1.7673 | |
| 1 | D | D | -1.5071 | |
| 2 | T | D | -0.4528 | |
| 3 | V | D | 0.5042 | |
| 4 | D | D | -0.9931 | |
| 5 | L | D | -1.3314 | |
| 6 | N | D | -2.2135 | |
| 7 | K | D | -2.1133 | |
| 8 | L | D | 0.0000 | |
| 9 | N | D | -3.0966 | |
| 10 | E | D | -3.3568 | |
| 11 | I | D | 0.0000 | |
| 12 | E | D | -2.4747 | |
| 13 | G | D | -2.1314 | |
| 14 | T | D | -2.2296 | |
| 15 | L | D | 0.0000 | |
| 16 | N | D | -2.6759 | |
| 17 | K | D | -3.5682 | |
| 18 | A | D | 0.0000 | |
| 19 | K | D | -2.8521 | |
| 20 | D | D | -3.4694 | |
| 21 | E | D | -2.9368 | |
| 22 | M | D | 0.0000 | |
| 23 | K | D | -2.9891 | |
| 24 | V | D | -0.5860 | |
| 25 | S | D | -1.6857 | |
| 26 | D | D | -3.1202 | |
| 27 | L | D | 0.0000 | |
| 28 | D | D | -3.9972 | |
| 29 | R | D | -4.1856 | |
| 30 | K | D | -3.7353 | |
| 31 | V | D | 0.0000 | |
| 32 | S | D | -3.1456 | |
| 33 | D | D | -4.2138 | |
| 34 | L | D | 0.0000 | |
| 35 | E | D | -3.7092 | |
| 36 | N | D | -3.9110 | |
| 37 | E | D | -3.9132 | |
| 38 | A | D | 0.0000 | |
| 39 | K | D | -4.0895 | |
| 40 | K | D | -3.6665 | |
| 41 | Q | D | -2.7752 | |
| 42 | E | D | -2.4408 | |
| 43 | A | D | -1.8187 | |
| 44 | A | D | -1.6320 | |
| 45 | I | D | 0.0000 | |
| 46 | M | D | -1.2265 | |
| 47 | D | D | -2.6177 | |
| 48 | Y | D | -2.0274 | |
| 49 | N | D | -2.4036 | |
| 50 | R | D | -3.6538 | |
| 51 | D | D | -3.2578 | |
| 52 | I | D | 0.0000 | |
| 53 | E | D | -3.8024 | |
| 54 | E | D | -3.5965 | |
| 55 | I | D | 0.0000 | |
| 56 | M | D | -2.1641 | |
| 57 | K | D | -2.9348 | |
| 58 | C | D | -2.3620 | |
| 59 | I | D | 0.0000 | |
| 60 | R | D | -2.8090 | |
| 61 | N | D | -2.6279 | |
| 62 | L | D | 0.0000 | |
| 63 | E | D | -2.8261 | |
| 64 | D | D | -3.2017 | |
| 65 | I | D | -2.0056 | |
| 66 | R | D | -2.6146 | |
| 67 | K | D | -2.7058 | |
| 68 | T | D | -1.2412 | |
| 69 | L | D | 0.0000 | |
| 70 | P | D | 0.0518 | |
| 71 | S | D | -0.2009 | |
| 72 | G | D | 0.3134 | |
| 73 | C | D | 1.4347 | |
| 74 | F | D | 1.7618 | |
| 75 | N | D | 0.1275 | |
| 76 | T | D | 0.3351 | |
| 77 | P | D | 0.1095 | |
| 78 | S | D | -0.3981 | |
| 79 | I | D | 0.3595 | |
| 80 | E | D | -1.8240 | |
| 81 | K | D | -2.1228 | |
| 82 | P | D | -1.3013 |