| Chain sequence(s) |
B: CGSGSAEEIEELEKKIEEAEEKLKEELPLVREAAELALEVIEANPESGVDPEPVREALEGVERGEDAAELLDKVYDAIIAALDADANPEGAKEAKEKADEALEKIIEVVKKRAKLKKKLKKLEL
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:34)
[INFO] Main: Simulation completed successfully. (00:06:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | B | 0.2055 | |
| 2 | G | B | -0.6272 | |
| 3 | S | B | -1.1067 | |
| 4 | G | B | -1.5671 | |
| 5 | S | B | -1.6437 | |
| 6 | A | B | -2.1062 | |
| 7 | E | B | -3.6862 | |
| 8 | E | B | -3.3657 | |
| 9 | I | B | -3.6385 | |
| 10 | E | B | -4.5449 | |
| 11 | E | B | -4.8404 | |
| 12 | L | B | 0.0000 | |
| 13 | E | B | -5.1414 | |
| 14 | K | B | -5.2265 | |
| 15 | K | B | -4.6031 | |
| 16 | I | B | 0.0000 | |
| 17 | E | B | -5.2377 | |
| 18 | E | B | -5.0383 | |
| 19 | A | B | 0.0000 | |
| 20 | E | B | -4.4107 | |
| 21 | E | B | -4.8140 | |
| 22 | K | B | -4.0145 | |
| 23 | L | B | 0.0000 | |
| 24 | K | B | -3.6937 | |
| 25 | E | B | -3.4539 | |
| 26 | E | B | -2.2466 | |
| 27 | L | B | 0.0000 | |
| 28 | P | B | -1.3880 | |
| 29 | L | B | -1.3366 | |
| 30 | V | B | 0.0000 | |
| 31 | R | B | -1.8745 | |
| 32 | E | B | -1.9103 | |
| 33 | A | B | 0.0000 | |
| 34 | A | B | 0.0000 | |
| 35 | E | B | -2.2962 | |
| 36 | L | B | -1.9476 | |
| 37 | A | B | 0.0000 | |
| 38 | L | B | -2.1881 | |
| 39 | E | B | -2.5647 | |
| 40 | V | B | 0.0000 | |
| 41 | I | B | 0.0000 | |
| 42 | E | B | -2.4974 | |
| 43 | A | B | -1.6359 | |
| 44 | N | B | -1.9917 | |
| 45 | P | B | -1.9967 | |
| 46 | E | B | -2.2958 | |
| 47 | S | B | -2.2315 | |
| 48 | G | B | -1.6938 | |
| 49 | V | B | -1.7790 | |
| 50 | D | B | -2.6809 | |
| 51 | P | B | -2.7576 | |
| 52 | E | B | -3.2101 | |
| 53 | P | B | -2.9977 | |
| 54 | V | B | 0.0000 | |
| 55 | R | B | -3.2403 | |
| 56 | E | B | -3.6031 | |
| 57 | A | B | 0.0000 | |
| 58 | L | B | -3.0779 | |
| 59 | E | B | -3.7933 | |
| 60 | G | B | 0.0000 | |
| 61 | V | B | -2.8895 | |
| 62 | E | B | -3.6207 | |
| 63 | R | B | -3.4256 | |
| 64 | G | B | -2.8301 | |
| 65 | E | B | -2.9823 | |
| 66 | D | B | -2.5475 | |
| 67 | A | B | 0.0000 | |
| 68 | A | B | -1.6863 | |
| 69 | E | B | -3.0114 | |
| 70 | L | B | 0.0000 | |
| 71 | L | B | 0.0000 | |
| 72 | D | B | -3.0437 | |
| 73 | K | B | -3.0286 | |
| 74 | V | B | 0.0000 | |
| 75 | Y | B | -1.5978 | |
| 76 | D | B | -2.0411 | |
| 77 | A | B | 0.0000 | |
| 78 | I | B | 0.0000 | |
| 79 | I | B | -0.4610 | |
| 80 | A | B | -1.0291 | |
| 81 | A | B | 0.0000 | |
| 82 | L | B | -1.7510 | |
| 83 | D | B | -1.9258 | |
| 84 | A | B | -1.8891 | |
| 85 | D | B | -2.6310 | |
| 86 | A | B | 0.0000 | |
| 87 | N | B | -2.3864 | |
| 88 | P | B | -2.7058 | |
| 89 | E | B | -3.2606 | |
| 90 | G | B | -2.6941 | |
| 91 | A | B | 0.0000 | |
| 92 | K | B | -3.4686 | |
| 93 | E | B | -3.5102 | |
| 94 | A | B | 0.0000 | |
| 95 | K | B | -2.7624 | |
| 96 | E | B | -3.6021 | |
| 97 | K | B | -2.7831 | |
| 98 | A | B | 0.0000 | |
| 99 | D | B | -2.6057 | |
| 100 | E | B | -2.7275 | |
| 101 | A | B | 0.0000 | |
| 102 | L | B | -1.5607 | |
| 103 | E | B | -2.6217 | |
| 104 | K | B | -2.5226 | |
| 105 | I | B | 0.0000 | |
| 106 | I | B | -0.7963 | |
| 107 | E | B | -2.5166 | |
| 108 | V | B | 0.0000 | |
| 109 | V | B | -1.3431 | |
| 110 | K | B | -2.5476 | |
| 111 | K | B | -2.5684 | |
| 112 | R | B | -3.1226 | |
| 113 | A | B | -2.6357 | |
| 114 | K | B | -3.7776 | |
| 115 | L | B | -3.5632 | |
| 116 | K | B | -4.4173 | |
| 117 | K | B | -4.6389 | |
| 118 | K | B | -4.0437 | |
| 119 | L | B | -3.9477 | |
| 120 | K | B | -4.0104 | |
| 121 | K | B | -3.3128 | |
| 122 | L | B | -1.9089 | |
| 123 | E | B | -2.1374 | |
| 124 | L | B | -0.1728 |