| Chain sequence(s) |
B: SAELKEMMERMERAIELAKRWAEEYPELAEHLEKLAEFYAAKKAELEAAA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:29)
[INFO] Main: Simulation completed successfully. (00:01:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | -1.2835 | |
| 2 | A | B | -1.7255 | |
| 3 | E | B | -2.7283 | |
| 4 | L | B | -2.3525 | |
| 5 | K | B | -3.4120 | |
| 6 | E | B | -3.4728 | |
| 7 | M | B | -2.5018 | |
| 8 | M | B | -2.9456 | |
| 9 | E | B | -3.6613 | |
| 10 | R | B | -3.8084 | |
| 11 | M | B | -2.4736 | |
| 12 | E | B | -3.2738 | |
| 13 | R | B | -3.4761 | |
| 14 | A | B | -2.0386 | |
| 15 | I | B | -2.2069 | |
| 16 | E | B | -2.5783 | |
| 17 | L | B | -1.3105 | |
| 18 | A | B | 0.0000 | |
| 19 | K | B | -3.4221 | |
| 20 | R | B | -3.1608 | |
| 21 | W | B | -1.8991 | |
| 22 | A | B | 0.0000 | |
| 23 | E | B | -3.4837 | |
| 24 | E | B | -2.9799 | |
| 25 | Y | B | -1.7270 | |
| 26 | P | B | -1.9183 | |
| 27 | E | B | -2.2981 | |
| 28 | L | B | -1.9036 | |
| 29 | A | B | -3.0186 | |
| 30 | E | B | -3.4582 | |
| 31 | H | B | -3.0126 | |
| 32 | L | B | 0.0000 | |
| 33 | E | B | -3.9375 | |
| 34 | K | B | -3.1562 | |
| 35 | L | B | -1.2528 | |
| 36 | A | B | 0.0000 | |
| 37 | E | B | -1.9815 | |
| 38 | F | B | 0.4280 | |
| 39 | Y | B | -0.6546 | |
| 40 | A | B | -0.7163 | |
| 41 | A | B | -0.7961 | |
| 42 | K | B | -1.5096 | |
| 43 | K | B | -2.0924 | |
| 44 | A | B | -1.5470 | |
| 45 | E | B | -2.6127 | |
| 46 | L | B | -1.8785 | |
| 47 | E | B | -2.5874 | |
| 48 | A | B | -1.4701 | |
| 49 | A | B | -0.8910 | |
| 50 | A | B | -0.9345 |