Project name: query_structure

Status: done

Started: 2026-03-17 01:10:28
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Chain sequence(s) A: VSDVPRDLEVVAATPTSLLISWDAPAVTVDFYVITYGETGYFSGFQEFEVPGSKSTATISGLKPGVDYTITVYAAGYGYAYGSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:09)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:10)
Show buried residues

Minimal score value
-3.3994
Maximal score value
2.347
Average score
-0.4584
Total score value
-41.7164

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.6139
2 S A 0.1469
3 D A -0.4412
4 V A -0.4872
5 P A 0.0000
6 R A -3.3179
7 D A -3.3994
8 L A 0.0000
9 E A -1.9024
10 V A 0.2118
11 V A 1.6035
12 A A 0.9340
13 A A 0.3310
14 T A -0.3310
15 P A -1.1159
16 T A -0.9941
17 S A -0.5189
18 L A 0.0000
19 L A 0.8050
20 I A 0.0000
21 S A -1.0984
22 W A 0.0000
23 D A -3.2548
24 A A -1.7166
25 P A -0.5939
26 A A 0.2019
27 V A 0.5286
28 T A -0.0989
29 V A -0.7344
30 D A -1.3795
31 F A 0.0000
32 Y A 0.0000
33 V A 0.0000
34 I A 0.0000
35 T A -0.9501
36 Y A -0.6746
37 G A 0.0000
38 E A -0.6920
39 T A -0.2960
40 G A 0.3742
41 Y A 1.8369
42 F A 2.3470
43 S A 0.8891
44 G A -0.0433
45 F A 0.0411
46 Q A -1.6955
47 E A -2.3072
48 F A -1.4296
49 E A -1.9400
50 V A 0.0000
51 P A -1.6750
52 G A -1.7348
53 S A -1.4559
54 K A -2.1136
55 S A -1.4635
56 T A -0.7482
57 A A 0.0000
58 T A 0.2457
59 I A 0.0000
60 S A -0.6551
61 G A -1.0270
62 L A 0.0000
63 K A -2.3678
64 P A -1.6665
65 G A -1.4590
66 V A -1.4233
67 D A -2.0303
68 Y A 0.0000
69 T A -0.6676
70 I A 0.0000
71 T A -0.2650
72 V A 0.0000
73 Y A 0.2550
74 A A 0.0000
75 A A 0.0000
76 G A 0.4615
77 Y A 1.1890
78 G A 0.7168
79 Y A 1.5534
80 A A 1.4093
81 Y A 1.5567
82 G A 0.4186
83 S A -0.0829
84 P A -0.1098
85 I A -0.3464
86 S A -0.6972
87 I A -0.6919
88 N A -1.6936
89 Y A -1.4366
90 R A -2.5231
91 T A -1.6404
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Laboratory of Theory of Biopolymers 2018