| Chain sequence(s) |
L: DPRAAFYYAWAPLKD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:09)
[INFO] Main: Simulation completed successfully. (00:00:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 0 | D | L | -2.0091 | |
| 1 | P | L | -0.9474 | |
| 2 | R | L | -1.8771 | |
| 3 | A | L | -0.4158 | |
| 4 | A | L | 0.3709 | |
| 5 | F | L | 1.7573 | |
| 6 | Y | L | 1.0929 | |
| 7 | Y | L | 1.4039 | |
| 8 | A | L | 0.4954 | |
| 9 | W | L | 1.1529 | |
| 10 | A | L | 0.2452 | |
| 11 | P | L | 0.3923 | |
| 12 | L | L | 1.3670 | |
| 13 | K | L | -0.9731 | |
| 14 | D | L | -2.2542 |