| Chain sequence(s) |
A: NFDANMNAINFDANFDANMNAIDNMNDNMNNMNAINFDADNMNNMNAIDNMN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:23)
[INFO] Main: Simulation completed successfully. (00:00:24)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | N | A | -1.1389 | |
| 2 | F | A | 0.0848 | |
| 3 | D | A | -1.8167 | |
| 4 | A | A | -1.2358 | |
| 5 | N | A | -1.0893 | |
| 6 | M | A | -0.5818 | |
| 7 | N | A | -1.1776 | |
| 8 | A | A | -0.3822 | |
| 9 | I | A | 0.9061 | |
| 10 | N | A | -0.4550 | |
| 11 | F | A | 0.6162 | |
| 12 | D | A | -0.9760 | |
| 13 | A | A | -0.8293 | |
| 14 | N | A | -1.2549 | |
| 15 | F | A | -0.0427 | |
| 16 | D | A | -1.9352 | |
| 17 | A | A | -1.6654 | |
| 18 | N | A | -2.0093 | |
| 19 | M | A | -1.5109 | |
| 20 | N | A | -2.4630 | |
| 21 | A | A | -1.6173 | |
| 22 | I | A | -1.4849 | |
| 23 | D | A | -3.2909 | |
| 24 | N | A | -3.1298 | |
| 25 | M | A | -1.7250 | |
| 26 | N | A | -2.7650 | |
| 27 | D | A | -3.9385 | |
| 28 | N | A | -2.8644 | |
| 29 | M | A | -1.6765 | |
| 30 | N | A | -3.0029 | |
| 31 | N | A | -2.2568 | |
| 32 | M | A | -0.5406 | |
| 33 | N | A | -1.6083 | |
| 34 | A | A | -0.7647 | |
| 35 | I | A | 0.3419 | |
| 36 | N | A | -1.2417 | |
| 37 | F | A | -0.0391 | |
| 38 | D | A | -1.4801 | |
| 39 | A | A | -1.4561 | |
| 40 | D | A | -2.7697 | |
| 41 | N | A | -2.2766 | |
| 42 | M | A | -1.4456 | |
| 43 | N | A | -2.5843 | |
| 44 | N | A | -2.4038 | |
| 45 | M | A | -1.3420 | |
| 46 | N | A | -2.0225 | |
| 47 | A | A | -1.2296 | |
| 48 | I | A | -0.9810 | |
| 49 | D | A | -2.3624 | |
| 50 | N | A | -1.8901 | |
| 51 | M | A | -0.4701 | |
| 52 | N | A | -1.3594 |