Project name: query_structure

Status: done

Started: 2026-03-17 01:18:47
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Chain sequence(s) A: VSSVPTKLEVVAATPTSLLISWDAFDGYWYDYVSYYRITYGETGGNSPVQEFTVPSSSSTATISGLKPGVDYTITVYAYSHSQQQYLSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:05)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:07)
Show buried residues

Minimal score value
-2.6361
Maximal score value
2.3341
Average score
-0.4268
Total score value
-40.9703

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.7595
2 S A 0.7479
3 S A 0.4230
4 V A 0.2582
5 P A 0.0000
6 T A -1.5232
7 K A -2.6361
8 L A 0.0000
9 E A -1.9278
10 V A 0.0952
11 V A 1.5267
12 A A 0.8903
13 A A 0.3017
14 T A -0.5511
15 P A -1.1983
16 T A -1.0443
17 S A -0.5468
18 L A 0.0000
19 L A 0.7408
20 I A 0.0000
21 S A -0.8052
22 W A 0.0000
23 D A -2.5893
24 A A -1.2472
25 F A -0.1163
26 D A -1.2421
27 G A 0.6396
28 Y A 1.8823
29 W A 2.3341
30 Y A 2.0815
31 D A 0.7418
32 Y A 1.3797
33 V A 0.0000
34 S A -0.1056
35 Y A 0.2965
36 Y A 0.0000
37 R A -0.3113
38 I A 0.0000
39 T A 0.0000
40 Y A -0.3151
41 G A 0.0000
42 E A -1.5692
43 T A -1.2587
44 G A -1.2363
45 G A -1.3959
46 N A -1.5374
47 S A -0.8604
48 P A -0.3289
49 V A 0.4247
50 Q A -0.8622
51 E A -1.6135
52 F A -0.5896
53 T A -0.1586
54 V A 0.0602
55 P A -0.2518
56 S A -0.0425
57 S A -0.4180
58 S A -0.4070
59 S A -0.5245
60 T A -0.2641
61 A A 0.0000
62 T A 0.2518
63 I A 0.0000
64 S A -0.6592
65 G A -1.0433
66 L A 0.0000
67 K A -2.4559
68 P A -1.8028
69 G A -1.5520
70 V A -1.5458
71 D A -2.1421
72 Y A 0.0000
73 T A -0.7715
74 I A 0.0000
75 T A -0.1544
76 V A 0.0000
77 Y A 0.2340
78 A A 0.0000
79 Y A -0.1738
80 S A 0.0000
81 H A -1.2739
82 S A -0.9041
83 Q A -1.4877
84 Q A -2.2537
85 Q A -1.6217
86 Y A -0.2068
87 L A 0.0000
88 S A -0.0683
89 P A 0.0691
90 I A 0.0252
91 S A -0.5325
92 I A -0.6987
93 N A -1.7057
94 Y A -1.4504
95 R A -2.5710
96 T A -1.5805
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Laboratory of Theory of Biopolymers 2018