| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDAFDGYWYDYVSYYRITYGETGGNSPVQEFTVPSSSSTATISGLKPGVDYTITVYAYSHSQQQYLSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:05)
[INFO] Main: Simulation completed successfully. (00:01:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.7595 | |
| 2 | S | A | 0.7479 | |
| 3 | S | A | 0.4230 | |
| 4 | V | A | 0.2582 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.5232 | |
| 7 | K | A | -2.6361 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.9278 | |
| 10 | V | A | 0.0952 | |
| 11 | V | A | 1.5267 | |
| 12 | A | A | 0.8903 | |
| 13 | A | A | 0.3017 | |
| 14 | T | A | -0.5511 | |
| 15 | P | A | -1.1983 | |
| 16 | T | A | -1.0443 | |
| 17 | S | A | -0.5468 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7408 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.8052 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.5893 | |
| 24 | A | A | -1.2472 | |
| 25 | F | A | -0.1163 | |
| 26 | D | A | -1.2421 | |
| 27 | G | A | 0.6396 | |
| 28 | Y | A | 1.8823 | |
| 29 | W | A | 2.3341 | |
| 30 | Y | A | 2.0815 | |
| 31 | D | A | 0.7418 | |
| 32 | Y | A | 1.3797 | |
| 33 | V | A | 0.0000 | |
| 34 | S | A | -0.1056 | |
| 35 | Y | A | 0.2965 | |
| 36 | Y | A | 0.0000 | |
| 37 | R | A | -0.3113 | |
| 38 | I | A | 0.0000 | |
| 39 | T | A | 0.0000 | |
| 40 | Y | A | -0.3151 | |
| 41 | G | A | 0.0000 | |
| 42 | E | A | -1.5692 | |
| 43 | T | A | -1.2587 | |
| 44 | G | A | -1.2363 | |
| 45 | G | A | -1.3959 | |
| 46 | N | A | -1.5374 | |
| 47 | S | A | -0.8604 | |
| 48 | P | A | -0.3289 | |
| 49 | V | A | 0.4247 | |
| 50 | Q | A | -0.8622 | |
| 51 | E | A | -1.6135 | |
| 52 | F | A | -0.5896 | |
| 53 | T | A | -0.1586 | |
| 54 | V | A | 0.0602 | |
| 55 | P | A | -0.2518 | |
| 56 | S | A | -0.0425 | |
| 57 | S | A | -0.4180 | |
| 58 | S | A | -0.4070 | |
| 59 | S | A | -0.5245 | |
| 60 | T | A | -0.2641 | |
| 61 | A | A | 0.0000 | |
| 62 | T | A | 0.2518 | |
| 63 | I | A | 0.0000 | |
| 64 | S | A | -0.6592 | |
| 65 | G | A | -1.0433 | |
| 66 | L | A | 0.0000 | |
| 67 | K | A | -2.4559 | |
| 68 | P | A | -1.8028 | |
| 69 | G | A | -1.5520 | |
| 70 | V | A | -1.5458 | |
| 71 | D | A | -2.1421 | |
| 72 | Y | A | 0.0000 | |
| 73 | T | A | -0.7715 | |
| 74 | I | A | 0.0000 | |
| 75 | T | A | -0.1544 | |
| 76 | V | A | 0.0000 | |
| 77 | Y | A | 0.2340 | |
| 78 | A | A | 0.0000 | |
| 79 | Y | A | -0.1738 | |
| 80 | S | A | 0.0000 | |
| 81 | H | A | -1.2739 | |
| 82 | S | A | -0.9041 | |
| 83 | Q | A | -1.4877 | |
| 84 | Q | A | -2.2537 | |
| 85 | Q | A | -1.6217 | |
| 86 | Y | A | -0.2068 | |
| 87 | L | A | 0.0000 | |
| 88 | S | A | -0.0683 | |
| 89 | P | A | 0.0691 | |
| 90 | I | A | 0.0252 | |
| 91 | S | A | -0.5325 | |
| 92 | I | A | -0.6987 | |
| 93 | N | A | -1.7057 | |
| 94 | Y | A | -1.4504 | |
| 95 | R | A | -2.5710 | |
| 96 | T | A | -1.5805 |