| Chain sequence(s) |
H: QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSLAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARGGSVSGTLVDFDIWGQGTMVTVSS
L: DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNIYPITFGGGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:26)
[INFO] Main: Simulation completed successfully. (00:01:28)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.5793 | |
| 2 | V | H | -1.1980 | |
| 3 | Q | H | -1.4740 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.3534 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.4865 | |
| 8 | G | H | -0.5275 | |
| 9 | A | H | 0.0778 | |
| 11 | E | H | 0.0203 | |
| 12 | V | H | 0.9768 | |
| 13 | K | H | -0.9375 | |
| 14 | K | H | -2.2117 | |
| 15 | P | H | -2.1426 | |
| 16 | G | H | -1.6175 | |
| 17 | S | H | -1.3026 | |
| 18 | S | H | -1.4503 | |
| 19 | V | H | 0.0000 | |
| 20 | K | H | -2.0282 | |
| 21 | V | H | 0.0000 | |
| 22 | S | H | -0.5193 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -0.5891 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.9366 | |
| 27 | G | H | -1.2815 | |
| 28 | G | H | -1.0502 | |
| 29 | T | H | -0.4969 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | 0.5336 | |
| 36 | S | H | 0.5368 | |
| 37 | L | H | 0.0000 | |
| 38 | A | H | 0.5231 | |
| 39 | I | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.5698 | |
| 45 | A | H | -0.9444 | |
| 46 | P | H | -0.8287 | |
| 47 | G | H | -1.2197 | |
| 48 | Q | H | -1.7407 | |
| 49 | G | H | -1.1144 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.7296 | |
| 52 | W | H | 0.0000 | |
| 53 | M | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | G | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | I | H | 1.4338 | |
| 58 | P | H | 0.0000 | |
| 59 | I | H | 2.6775 | |
| 62 | F | H | 2.7907 | |
| 63 | G | H | 0.9894 | |
| 64 | T | H | 0.7742 | |
| 65 | A | H | 0.1733 | |
| 66 | N | H | -0.3068 | |
| 67 | Y | H | -0.7388 | |
| 68 | A | H | 0.0000 | |
| 69 | Q | H | -2.6201 | |
| 70 | K | H | -2.7248 | |
| 71 | F | H | 0.0000 | |
| 72 | Q | H | -2.4366 | |
| 74 | G | H | -1.6535 | |
| 75 | R | H | -1.5763 | |
| 76 | V | H | 0.0000 | |
| 77 | T | H | -0.9149 | |
| 78 | I | H | 0.0000 | |
| 79 | T | H | -0.3910 | |
| 80 | A | H | -0.0436 | |
| 81 | D | H | -0.8318 | |
| 82 | E | H | -0.8803 | |
| 83 | S | H | -0.7953 | |
| 84 | T | H | -0.7121 | |
| 85 | S | H | -0.9171 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.6081 | |
| 89 | M | H | 0.0000 | |
| 90 | E | H | -1.6672 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -1.2007 | |
| 93 | S | H | -1.2602 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -3.1229 | |
| 96 | S | H | -2.3424 | |
| 97 | E | H | -2.4575 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.7969 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.2717 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | -0.3525 | |
| 107 | G | H | 0.0000 | |
| 108 | G | H | 0.0000 | |
| 109 | S | H | 0.5624 | |
| 110 | V | H | 1.5454 | |
| 111 | S | H | 0.4294 | |
| 111A | G | H | -0.1681 | |
| 112A | T | H | 0.1376 | |
| 112 | L | H | 0.4442 | |
| 113 | V | H | 0.0000 | |
| 114 | D | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.3788 | |
| 117 | I | H | -0.5753 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.4199 | |
| 121 | G | H | -0.6751 | |
| 122 | T | H | 0.0000 | |
| 123 | M | H | 0.3789 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.2213 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.9725 | |
| 128 | S | H | -0.7669 | |
| 1 | D | L | -1.8720 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -1.9257 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.3139 | |
| 6 | Q | L | -1.0044 | |
| 7 | S | L | -0.6951 | |
| 8 | P | L | -0.5353 | |
| 9 | S | L | -0.7317 | |
| 10 | T | L | -0.8068 | |
| 11 | L | L | -0.3311 | |
| 12 | S | L | -0.5113 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.0512 | |
| 15 | V | L | 0.8064 | |
| 16 | G | L | -0.4621 | |
| 17 | D | L | -1.4653 | |
| 18 | R | L | -2.0905 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.5934 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.8035 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.6185 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.6712 | |
| 27 | Q | L | -1.6009 | |
| 28 | S | L | -1.0809 | |
| 29 | I | L | 0.0000 | |
| 36 | S | L | -0.6279 | |
| 37 | S | L | -0.5196 | |
| 38 | W | L | 0.0467 | |
| 39 | L | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.7689 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.6229 | |
| 46 | P | L | -1.2110 | |
| 47 | G | L | -1.6109 | |
| 48 | K | L | -2.5250 | |
| 49 | A | L | -1.5415 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.1781 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.1104 | |
| 56 | K | L | -0.3491 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.3919 | |
| 66 | S | L | -0.1024 | |
| 67 | L | L | 0.2056 | |
| 68 | E | L | -0.2959 | |
| 69 | S | L | -0.4062 | |
| 70 | G | L | -0.5167 | |
| 71 | V | L | -0.3110 | |
| 72 | P | L | -0.3436 | |
| 74 | S | L | -0.3982 | |
| 75 | R | L | -0.7839 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.3209 | |
| 78 | G | L | -0.3297 | |
| 79 | S | L | -0.7010 | |
| 80 | G | L | -1.0334 | |
| 83 | S | L | -0.9917 | |
| 84 | G | L | -0.9970 | |
| 85 | T | L | -1.4965 | |
| 86 | E | L | -1.8507 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7241 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.5969 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.1997 | |
| 93 | S | L | -1.0395 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.8204 | |
| 96 | P | L | -0.7245 | |
| 97 | D | L | -1.8462 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.3631 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.8726 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | 0.0000 | |
| 108 | N | L | 0.2680 | |
| 109 | I | L | 0.9981 | |
| 114 | Y | L | 0.8450 | |
| 115 | P | L | -0.1622 | |
| 116 | I | L | 0.0000 | |
| 117 | T | L | -0.3466 | |
| 118 | F | L | -0.2245 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -0.9045 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.5302 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -0.6373 | |
| 126 | I | L | 1.0608 | |
| 127 | K | L | -0.7471 |