| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLRLSCAASGFTISNYGMSWVRQAPGKGLEWVSAITVSGGRAYYADSVKGRFTISRDNAKNTVYLQMNSLRAEDTAVYYCARDRVVVAGIAFDYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:04)
[INFO] Main: Simulation completed successfully. (00:01:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 2 | E | A | -2.1753 | |
| 3 | V | A | -1.2808 | |
| 4 | Q | A | -1.4315 | |
| 5 | L | A | 0.0000 | |
| 6 | V | A | 0.4209 | |
| 7 | E | A | 0.0000 | |
| 8 | S | A | -0.2578 | |
| 9 | G | A | -0.6428 | |
| 10 | G | A | -0.0299 | |
| 11 | G | A | 0.5648 | |
| 12 | L | A | 1.2730 | |
| 13 | V | A | 0.0000 | |
| 14 | Q | A | -1.3949 | |
| 15 | P | A | -1.7509 | |
| 16 | G | A | -1.4028 | |
| 17 | G | A | -0.9925 | |
| 18 | S | A | -1.2629 | |
| 19 | L | A | -0.9720 | |
| 20 | R | A | -1.9823 | |
| 21 | L | A | 0.0000 | |
| 22 | S | A | -0.4625 | |
| 23 | C | A | 0.0000 | |
| 24 | A | A | -0.3100 | |
| 25 | A | A | 0.0000 | |
| 26 | S | A | -1.0202 | |
| 27 | G | A | -1.2875 | |
| 28 | F | A | -0.7422 | |
| 29 | T | A | -0.5808 | |
| 30 | I | A | 0.0000 | |
| 31 | S | A | -0.9432 | |
| 32 | N | A | -0.6930 | |
| 33 | Y | A | 0.1900 | |
| 34 | G | A | 0.0000 | |
| 35 | M | A | 0.0000 | |
| 36 | S | A | 0.0000 | |
| 37 | W | A | 0.0000 | |
| 38 | V | A | 0.0000 | |
| 39 | R | A | 0.0000 | |
| 40 | Q | A | -0.3939 | |
| 41 | A | A | -1.0274 | |
| 42 | P | A | -0.9941 | |
| 43 | G | A | -1.3980 | |
| 44 | K | A | -2.0834 | |
| 45 | G | A | -0.9343 | |
| 46 | L | A | 0.4825 | |
| 47 | E | A | -0.3776 | |
| 48 | W | A | 0.2878 | |
| 49 | V | A | 0.0000 | |
| 50 | S | A | 0.0000 | |
| 51 | A | A | 0.0000 | |
| 52 | I | A | 0.0000 | |
| 53 | T | A | 0.0000 | |
| 54 | V | A | 0.1527 | |
| 55 | S | A | -0.7945 | |
| 56 | G | A | -1.2401 | |
| 57 | G | A | -1.2941 | |
| 58 | R | A | -1.7596 | |
| 59 | A | A | -0.6898 | |
| 60 | Y | A | -0.1735 | |
| 61 | Y | A | -0.4858 | |
| 62 | A | A | -1.1394 | |
| 63 | D | A | -2.4004 | |
| 64 | S | A | -1.6047 | |
| 65 | V | A | 0.0000 | |
| 66 | K | A | -2.5570 | |
| 67 | G | A | -1.7793 | |
| 68 | R | A | -1.4013 | |
| 69 | F | A | 0.0000 | |
| 70 | T | A | -0.7553 | |
| 71 | I | A | 0.0000 | |
| 72 | S | A | -0.7127 | |
| 73 | R | A | -1.0845 | |
| 74 | D | A | -1.8363 | |
| 75 | N | A | -1.8043 | |
| 76 | A | A | -1.4257 | |
| 77 | K | A | -2.3634 | |
| 78 | N | A | -1.8059 | |
| 79 | T | A | -1.1312 | |
| 80 | V | A | 0.0000 | |
| 81 | Y | A | -0.5425 | |
| 82 | L | A | 0.0000 | |
| 83 | Q | A | -1.1824 | |
| 84 | M | A | 0.0000 | |
| 85 | N | A | -1.4423 | |
| 86 | S | A | -1.2709 | |
| 87 | L | A | 0.0000 | |
| 88 | R | A | -2.2750 | |
| 89 | A | A | -1.7262 | |
| 90 | E | A | -2.1962 | |
| 91 | D | A | 0.0000 | |
| 92 | T | A | -0.5272 | |
| 93 | A | A | 0.0000 | |
| 94 | V | A | 0.6210 | |
| 95 | Y | A | 0.0000 | |
| 96 | Y | A | 0.4618 | |
| 97 | C | A | 0.0000 | |
| 98 | A | A | 0.0000 | |
| 99 | R | A | 0.0000 | |
| 100 | D | A | 0.0000 | |
| 101 | R | A | -0.1633 | |
| 102 | V | A | 1.7151 | |
| 103 | V | A | 2.3079 | |
| 104 | V | A | 2.2656 | |
| 105 | A | A | 1.6307 | |
| 106 | G | A | 0.0000 | |
| 107 | I | A | 2.3763 | |
| 108 | A | A | 0.8736 | |
| 109 | F | A | 0.8215 | |
| 110 | D | A | -0.1175 | |
| 111 | Y | A | 0.3455 | |
| 112 | W | A | 0.5478 | |
| 113 | G | A | -0.1372 | |
| 114 | Q | A | -0.8533 | |
| 115 | G | A | -0.0656 | |
| 116 | T | A | 0.3299 | |
| 117 | L | A | 1.1924 | |
| 118 | V | A | 0.0000 | |
| 119 | T | A | 0.2201 | |
| 120 | V | A | 0.0000 | |
| 121 | S | A | -0.7615 | |
| 122 | S | A | -0.4980 |