| Chain sequence(s) |
H: EVQLQQSGPELVKPGASVKISCRTSGYTFTDYYMNWVKRSHGKSLEWIGDIYPNNGVTTYNRKFKGKATLTVDKSSSTAYMELRSLTSEDSSVYYCAKTGDWTVGYFDVWGTGTTVTVSS
L: QIVLTQSPAIMSASPGEKVTISCSASSSVSYMYWYQQKPGSSPKPWIYRTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAATYYCQQYHSYPRTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:45)
[INFO] Main: Simulation completed successfully. (00:01:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.9975 | |
| 2 | V | H | -1.0388 | |
| 3 | Q | H | -2.0765 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -2.2573 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -1.1072 | |
| 8 | G | H | -0.7906 | |
| 9 | P | H | -0.4389 | |
| 11 | E | H | -0.4553 | |
| 12 | L | H | 0.7839 | |
| 13 | V | H | -0.2872 | |
| 14 | K | H | -1.7070 | |
| 15 | P | H | -1.3963 | |
| 16 | G | H | -1.2198 | |
| 17 | A | H | -0.9725 | |
| 18 | S | H | -1.0781 | |
| 19 | V | H | -0.7993 | |
| 20 | K | H | -1.3696 | |
| 21 | I | H | 0.0000 | |
| 22 | S | H | -0.9133 | |
| 23 | C | H | 0.0000 | |
| 24 | R | H | -2.5017 | |
| 25 | T | H | 0.0000 | |
| 26 | S | H | -1.5223 | |
| 27 | G | H | -1.1263 | |
| 28 | Y | H | -0.6143 | |
| 29 | T | H | -0.4430 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -1.2458 | |
| 36 | D | H | -1.2667 | |
| 37 | Y | H | 0.0581 | |
| 38 | Y | H | 0.7240 | |
| 39 | M | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | K | H | 0.0000 | |
| 44 | R | H | 0.0000 | |
| 45 | S | H | -1.5227 | |
| 46 | H | H | -1.9194 | |
| 47 | G | H | -1.7801 | |
| 48 | K | H | -2.4343 | |
| 49 | S | H | -1.4114 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.0038 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | D | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | Y | H | 0.1721 | |
| 58 | P | H | 0.0000 | |
| 59 | N | H | -1.5860 | |
| 62 | N | H | -1.3862 | |
| 63 | G | H | -0.4086 | |
| 64 | V | H | 0.8444 | |
| 65 | T | H | 0.5539 | |
| 66 | T | H | 0.0233 | |
| 67 | Y | H | -1.0948 | |
| 68 | N | H | 0.0000 | |
| 69 | R | H | -3.3136 | |
| 70 | K | H | -3.2106 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -3.0598 | |
| 74 | G | H | -2.0239 | |
| 75 | K | H | -1.8190 | |
| 76 | A | H | 0.0000 | |
| 77 | T | H | -0.7627 | |
| 78 | L | H | 0.0000 | |
| 79 | T | H | 0.0937 | |
| 80 | V | H | -0.5328 | |
| 81 | D | H | -1.3605 | |
| 82 | K | H | -1.9392 | |
| 83 | S | H | -1.0082 | |
| 84 | S | H | -1.0367 | |
| 85 | S | H | -1.2576 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.3590 | |
| 89 | M | H | 0.0000 | |
| 90 | E | H | -0.9471 | |
| 91 | L | H | 0.0000 | |
| 92 | R | H | -1.2336 | |
| 93 | S | H | -1.0663 | |
| 94 | L | H | 0.0000 | |
| 95 | T | H | -1.2671 | |
| 96 | S | H | -1.4454 | |
| 97 | E | H | -2.0661 | |
| 98 | D | H | 0.0000 | |
| 99 | S | H | -0.7271 | |
| 100 | S | H | 0.0000 | |
| 101 | V | H | 0.0207 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | K | H | 0.0000 | |
| 107 | T | H | 0.2335 | |
| 108 | G | H | 0.1562 | |
| 109 | D | H | 0.0616 | |
| 110 | W | H | 0.9051 | |
| 111 | T | H | 0.3868 | |
| 112 | V | H | 0.0000 | |
| 113 | G | H | 0.0000 | |
| 114 | Y | H | 0.1599 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.4945 | |
| 117 | V | H | -0.3114 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | T | H | -0.5888 | |
| 121 | G | H | -0.3565 | |
| 122 | T | H | 0.0000 | |
| 123 | T | H | -0.0909 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.2153 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.6017 | |
| 128 | S | H | -0.7465 | |
| 1 | Q | L | -0.9131 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 1.2325 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | 0.0743 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.0879 | |
| 8 | P | L | 0.2841 | |
| 9 | A | L | 0.6249 | |
| 10 | I | L | 1.4897 | |
| 11 | M | L | 0.4273 | |
| 12 | S | L | -0.7325 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -1.7576 | |
| 15 | P | L | -1.8849 | |
| 16 | G | L | -1.9653 | |
| 17 | E | L | -2.8653 | |
| 18 | K | L | -2.7350 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6946 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.3481 | |
| 23 | C | L | 0.0000 | |
| 24 | S | L | -0.1952 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | 0.0380 | |
| 27 | S | L | -0.2677 | |
| 28 | S | L | -0.5965 | |
| 29 | V | L | 0.0000 | |
| 37 | S | L | -0.3411 | |
| 38 | Y | L | 0.0369 | |
| 39 | M | L | 0.0000 | |
| 40 | Y | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -1.0986 | |
| 45 | K | L | -1.3797 | |
| 46 | P | L | -0.8117 | |
| 47 | G | L | -0.8151 | |
| 48 | S | L | -0.8947 | |
| 49 | S | L | -0.7423 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.8033 | |
| 52 | P | L | 0.0000 | |
| 53 | W | L | -0.4600 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.2295 | |
| 56 | R | L | -0.5467 | |
| 57 | T | L | 0.0000 | |
| 65 | S | L | -0.7492 | |
| 66 | N | L | -1.0824 | |
| 67 | L | L | -0.2193 | |
| 68 | A | L | 0.0000 | |
| 69 | S | L | -0.4286 | |
| 70 | G | L | -0.4025 | |
| 71 | V | L | -0.1277 | |
| 72 | P | L | -0.0835 | |
| 74 | A | L | -0.0623 | |
| 75 | R | L | -0.6412 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.4190 | |
| 78 | G | L | -0.5219 | |
| 79 | S | L | -0.6405 | |
| 80 | G | L | -0.5992 | |
| 83 | S | L | -0.5438 | |
| 84 | G | L | -0.5457 | |
| 85 | T | L | -0.5273 | |
| 86 | S | L | -0.6383 | |
| 87 | Y | L | 0.0000 | |
| 88 | S | L | -0.3912 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.5916 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.4313 | |
| 93 | S | L | -1.8254 | |
| 94 | M | L | 0.0000 | |
| 95 | E | L | -2.2985 | |
| 96 | A | L | -1.6617 | |
| 97 | E | L | -2.2487 | |
| 98 | D | L | 0.0000 | |
| 99 | A | L | -1.4560 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.5427 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | -0.0444 | |
| 108 | H | L | -0.6391 | |
| 109 | S | L | -0.4939 | |
| 114 | Y | L | -0.2024 | |
| 115 | P | L | 0.0000 | |
| 116 | R | L | -0.2193 | |
| 117 | T | L | 0.0000 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -0.7395 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.4491 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.4318 | |
| 126 | I | L | -1.0897 | |
| 127 | K | L | -1.8097 |